Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6002e-017.44e-22 c.1.15.4
1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8373e-014.28e-23
1qtwA/T0296-1qtwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qtwA/T0296-1qtwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6318e-011.51e-14 1qumA c.1.15.1
1lt8A/T0296-1lt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lt8A/T0296-1lt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0426e+004.54e-22 c.1.26.1
1jclA/T0296-1jclA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jclA/T0296-1jclA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2052e+002.10e-23 c.1.10.1
1uqrA/T0296-1uqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqrA/T0296-1uqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2501e+008.82e-11 c.23.13.1
1sfjA/T0296-1sfjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfjA/T0296-1sfjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5873e+003.62e-13
1c93A/T0296-1c93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7360e+006.87e-17 2ebn c.1.8.5
2cw6A/T0296-2cw6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cw6A/T0296-2cw6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1441e+001.80e-25
1sflA/T0296-1sflA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sflA/T0296-1sflA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4444e+001.93e-13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001