Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4384e-027.46e-22 c.1.15.4
1c93A/T0296-1c93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2348e-018.89e-16 2ebn c.1.8.5
1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4441e-011.40e-14 1qumA c.1.15.1
1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5201e-011.90e-16 c.79.1.1
1ufoA/T0296-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufoA/T0296-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6718e-015.14e-05 c.69.1.27
1pdo/T0296-1pdo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pdo/T0296-1pdo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9895e-011.45e-05 1pdo c.54.1.1
1jmvA/T0296-1jmvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jmvA/T0296-1jmvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4834e-011.55e-08 c.26.2.4
1vyrA/T0296-1vyrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vyrA/T0296-1vyrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6180e-011.83e-09 c.1.4.1
1gtzA/T0296-1gtzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gtzA/T0296-1gtzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5144e-012.64e-10 c.23.13.1
1e6uA/T0296-1e6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e6uA/T0296-1e6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0674e+004.88e-15 1bsvA c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001