Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2b06A/T0296-2b06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b06A/T0296-2b06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9813e+001.15e-08
1amuA/T0296-1amuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1amuA/T0296-1amuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5743e+003.80e-08 1amuA e.23.1.1
1om4A/T0296-1om4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1om4A/T0296-1om4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4955e+017.97e-10 d.174.1.1
1o50A/T0296-1o50A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o50A/T0296-1o50A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9166e+011.15e-07 d.37.1.1
d.37.1.1
1x38A/T0296-1x38A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x38A/T0296-1x38A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0596e+013.15e-02
1tv8A/T0296-1tv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tv8A/T0296-1tv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6588e+018.02e-04 c.1.28.3
1jmxB/T0296-1jmxB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jmxB/T0296-1jmxB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9778e+013.24e-03 b.69.2.2
1ex1A/T0296-1ex1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ex1A/T0296-1ex1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3458e+013.19e-03 1ex1A c.1.8.7
c.23.11.1
1rypI/T0296-1rypI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rypI/T0296-1rypI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6036e+012.33e-10 d.153.1.4
2bjvA/T0296-2bjvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bjvA/T0296-2bjvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6673e+015.70e+03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001