Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1q7rA/T0296-1q7rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7rA/T0296-1q7rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9431e+011.82e-06 c.23.16.1
1amuA/T0296-1amuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1amuA/T0296-1amuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1361e+013.80e-08 1amuA e.23.1.1
1tozA/T0296-1tozA-t2k-global-adpstyle1.a2m 1tozA/T0296-1tozA-t2k-global-adpstyle1.al 2.2065e+016.84e-03
1om4A/T0296-1om4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1om4A/T0296-1om4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3696e+013.48e-09 d.174.1.1
1ex1A/T0296-1ex1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ex1A/T0296-1ex1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4025e+011.08e-01 1ex1A c.1.8.7
c.23.11.1
1pfkA/T0296-1pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pfkA/T0296-1pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7075e+011.89e-06 3pfk c.89.1.1
2dorA/T0296-2dorA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dorA/T0296-2dorA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7797e+012.47e-05 2dorA c.1.4.1
2b06A/T0296-2b06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b06A/T0296-2b06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1519e+011.84e-05
1zxxA/T0296-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0296-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6364e+013.44e-04
1x38A/T0296-1x38A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x38A/T0296-1x38A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8096e+014.76e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001