Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0101e-406.49e-140
1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8134e-392.68e-132 c.66.1.24
1jg1A/T0295-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6175e-175.86e-49 c.66.1.7
1dl5A/T0295-1dl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7673e-152.58e-46 1dl5A c.66.1.7
d.197.1.1
1uwvA/T0295-1uwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uwvA/T0295-1uwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2200e-141.23e-50 b.40.4.12
c.66.1.40
1xxlA/T0295-1xxlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2234e-142.36e-63
1dusA/T0295-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0295-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3588e-132.56e-45 1dusA c.66.1.4
1vl5A/T0295-1vl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0295-1vl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3981e-136.54e-57 c.66.1.41
1l3iA/T0295-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0295-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4163e-131.19e-45 c.66.1.22
1ve3A/T0295-1ve3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0295-1ve3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8826e-134.99e-39

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001