Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4398e-221.82e-56 1g6q2 c.66.1.6
1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4507e-191.63e-56 c.66.1.7
1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5592e-173.94e-61 1dl5A c.66.1.7
d.197.1.1
1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5162e-165.35e-56 c.66.1.13
1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0603e-158.80e-51 2admA c.66.1.27
1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9682e-151.49e-40 1dusA c.66.1.4
1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7404e-143.49e-55 c.66.1.14
1ne2A/T0295-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne2A/T0295-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6822e-132.75e-40 c.66.1.32
1i4wA/T0295-1i4wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i4wA/T0295-1i4wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8681e-111.45e-61 c.66.1.24
1sqgA/T0295-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0295-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7410e-103.14e-30 a.79.1.3
c.66.1.38

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001