Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9908e-019.41e-46
1i4wA/T0295-1i4wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i4wA/T0295-1i4wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4624e-011.62e-06 c.66.1.24
1dk0A/T0295-1dk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dk0A/T0295-1dk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2245e-014.16e-03 1b2vA d.35.1.1
1a3aA/T0295-1a3aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a3aA/T0295-1a3aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0748e+005.98e-01 1a3aA d.112.1.1
1i58A/T0295-1i58A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i58A/T0295-1i58A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4832e+005.84e-01 1b3qA d.122.1.3
1fs1B/T0295-1fs1B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fs1B/T0295-1fs1B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8027e+003.10e+01 1vcbB a.157.1.1
d.42.1.1
1hlvA/T0295-1hlvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hlvA/T0295-1hlvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2212e+004.61e-01 a.4.1.7
a.4.1.7
1a7s/T0295-1a7s-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a7s/T0295-1a7s-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9888e+004.73e-04 1a7s b.47.1.2
1cy5A/T0295-1cy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cy5A/T0295-1cy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7543e+001.41e-07 1cy5A a.77.1.3
1cnzA/T0295-1cnzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cnzA/T0295-1cnzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7578e+004.33e-03 1cnzA c.77.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001