Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8342e-185.96e-98
1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6992e-175.32e-62 c.66.1.7
1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1429e-168.32e-92 c.66.1.24
1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2317e-152.99e-60 1dl5A c.66.1.7
d.197.1.1
1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5464e-141.49e-46 1dusA c.66.1.4
1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0406e-133.37e-59 1g6q2 c.66.1.6
1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3527e-136.45e-54 c.66.1.13
1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6126e-123.73e-53 c.66.1.14
1xxlA/T0295-1xxlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1561e-122.77e-69
1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3959e-121.16e-50 2admA c.66.1.27

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001