Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3549e-284.26e-92
1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2831e-261.82e-83 c.66.1.24
1jg1A/T0295-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6421e-195.60e-59 c.66.1.7
1uwvA/T0295-1uwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uwvA/T0295-1uwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9406e-184.42e-54 b.40.4.12
c.66.1.40
1xxlA/T0295-1xxlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9975e-182.72e-61
1vl5A/T0295-1vl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0295-1vl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7463e-173.27e-57 c.66.1.41
1ve3A/T0295-1ve3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0295-1ve3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9439e-171.71e-49
1dl5A/T0295-1dl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2764e-164.27e-54 1dl5A c.66.1.7
d.197.1.1
1wznA/T0295-1wznA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0295-1wznA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6886e-168.79e-56
1l3iA/T0295-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0295-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9212e-165.94e-49 c.66.1.22

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001