Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8311e-185.32e-62 c.66.1.7
1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0295-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0868e-183.37e-59 1g6q2 c.66.1.6
1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3539e-182.99e-60 1dl5A c.66.1.7
d.197.1.1
1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0295-1dusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9661e-171.49e-46 1dusA c.66.1.4
1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9gA/T0295-1i9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0849e-166.45e-54 c.66.1.13
1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0295-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4130e-151.16e-50 2admA c.66.1.27
1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0295-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0612e-143.73e-53 c.66.1.14
1ne2A/T0295-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne2A/T0295-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1954e-138.95e-45 c.66.1.32
1sqgA/T0295-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0295-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5913e-137.59e-44 a.79.1.3
c.66.1.38
1ixkA/T0295-1ixkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ixkA/T0295-1ixkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0417e-128.34e-44 c.66.1.38

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001