Best Alignments for T0294

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wwkA/T0294-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0294-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9264e-503.36e-190
2g76A/T0294-2g76A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g76A/T0294-2g76A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9770e-482.97e-182
1psdA/T0294-1psdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1psdA/T0294-1psdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2008e-473.38e-174 1psdA c.2.1.4
c.23.12.1
d.58.18.1
1gdhA/T0294-1gdhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gdhA/T0294-1gdhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8482e-452.16e-174 1gdhA c.2.1.4
c.23.12.1
2d0iA/T0294-2d0iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0iA/T0294-2d0iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0553e-451.40e-169
2nacA/T0294-2nacA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nacA/T0294-2nacA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1774e-441.67e-164 2nadA c.2.1.4
c.23.12.1
1sc6A/T0294-1sc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0294-1sc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7417e-442.32e-162
1xdwA/T0294-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0294-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8924e-426.04e-152
1b3rA/T0294-1b3rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b3rA/T0294-1b3rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1833e-177.49e-60 1b3rA c.2.1.4
c.23.12.3
1v8bA/T0294-1v8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8bA/T0294-1v8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2740e-151.25e-50

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001