Best Alignments for T0294

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wwkA/T0294-1wwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0294-1wwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5342e-441.91e-209
2g76A/T0294-2g76A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g76A/T0294-2g76A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5892e-421.62e-201
2d0iA/T0294-2d0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0iA/T0294-2d0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4101e-401.01e-186
1psdA/T0294-1psdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1psdA/T0294-1psdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0208e-405.87e-185 1psdA c.2.1.4
c.23.12.1
d.58.18.1
2nacA/T0294-2nacA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nacA/T0294-2nacA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0529e-385.23e-169 2nadA c.2.1.4
c.23.12.1
1gdhA/T0294-1gdhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gdhA/T0294-1gdhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1402e-383.71e-193 1gdhA c.2.1.4
c.23.12.1
2dldA/T0294-2dldA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dldA/T0294-2dldA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9400e-383.50e-157 1dxy c.2.1.4
c.23.12.1
1sc6A/T0294-1sc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0294-1sc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9283e-375.48e-175
1xdwA/T0294-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0294-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8261e-352.49e-164
1b3rA/T0294-1b3rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b3rA/T0294-1b3rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8900e-341.53e-90 1b3rA c.2.1.4
c.23.12.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001