Please cite the following papers:
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Description | Link to file | Date |
Inputs |
Submitted sequence(s) | T0293.a2m | 2006 May 16 23:28:59 |
README file | README | 2006 Jun 6 12:54:42 |
Provided documentation | T0293.doc.html | 2006 May 17 20:26:41 |
Quick blastp of non-redundant PDB | T0293.pdb.blast | 2006 May 18 16:02:59 |
Multiple alignment |
SAM_t06 multiple alignment in a2m format | T0293.t06.a2m.gz | 2006 May 18 10:55:35 |
SAM_t06 multiple alignment in pretty html format | T0293.t06.pa.html | 2006 May 18 10:58:54 |
SAM_t06 target hidden Markov model | T0293.t06.w0.5.mod | 2006 May 18 10:59:40 |
SAM_t06 multiple alignment---sequence logo (eps format) (pdf format) | T0293.t06.w0.5-logo | 2006 May 18 11:00:47 |
Script for highlighting in rasmol | conserved_t06 | 2006 May 18 11:00:49 |
SAM_t04 multiple alignment in a2m format | T0293.t04.a2m.gz | 2006 May 18 11:30:02 |
SAM_t04 multiple alignment in pretty html format | T0293.t04.pa.html | 2006 May 18 11:31:32 |
SAM_t04 target hidden Markov model | T0293.t04.w0.5.mod | 2006 May 18 11:31:39 |
SAM_t04 multiple alignment---sequence logo (eps format) (pdf format) | T0293.t04.w0.5-logo | 2006 May 18 11:31:56 |
Script for highlighting in rasmol | conserved_t04 | 2006 May 18 11:31:57 |
SAM_t2k multiple alignment in a2m format | T0293.t2k.a2m.gz | 2006 May 18 11:42:53 |
SAM_t2k multiple alignment in pretty html format | T0293.t2k.pa.html | 2006 May 18 11:43:08 |
SAM_t2k target hidden Markov model | T0293.t2k.w0.5.mod | 2006 May 18 11:43:11 |
SAM_t2k multiple alignment---sequence logo (eps format) (pdf format) | T0293.t2k.w0.5-logo | 2006 May 18 11:43:19 |
Script for highlighting in rasmol | conserved_t2k | 2006 May 18 11:43:20 |
Secondary Structure Prediction (Explanation of secondary-structure predictions) |
str2 structure prediction (rdb format) (seq format) | T0293.t06.str2 | 2006 May 18 11:00:42 |
Script for T0293.t06.str2 coloring in rasmol | T0293.t06.str2-color.rasmol | 2006 May 18 11:43:22 |
str2---sequence logo (eps format) (pdf format) | T0293.t06.str2-logo | 2006 May 18 11:43:27 |
str2 structure prediction (rdb format) (seq format) | T0293.t04.str2 | 2006 May 18 11:31:52 |
Script for T0293.t04.str2 coloring in rasmol | T0293.t04.str2-color.rasmol | 2006 May 18 11:43:29 |
str2---sequence logo (eps format) (pdf format) | T0293.t04.str2-logo | 2006 May 18 11:43:36 |
str2 structure prediction (rdb format) (seq format) | T0293.t2k.str2 | 2006 May 18 11:43:15 |
Script for T0293.t2k.str2 coloring in rasmol | T0293.t2k.str2-color.rasmol | 2006 May 18 11:43:37 |
str2---sequence logo (eps format) (pdf format) | T0293.t2k.str2-logo | 2006 May 18 11:43:41 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t06.stride-ebghtl | 2006 May 18 11:43:57 |
Script for T0293.t06.stride-ebghtl coloring in rasmol | T0293.t06.stride-ebghtl-color.rasmol | 2006 May 18 11:43:57 |
stride-ebghtl---sequence logo (eps format) (pdf format) | T0293.t06.stride-ebghtl-logo | 2006 May 18 11:44:01 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t04.stride-ebghtl | 2006 May 18 11:44:07 |
Script for T0293.t04.stride-ebghtl coloring in rasmol | T0293.t04.stride-ebghtl-color.rasmol | 2006 May 18 11:44:07 |
stride-ebghtl---sequence logo (eps format) (pdf format) | T0293.t04.stride-ebghtl-logo | 2006 May 18 11:44:11 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t2k.stride-ebghtl | 2006 May 18 11:44:13 |
Script for T0293.t2k.stride-ebghtl coloring in rasmol | T0293.t2k.stride-ebghtl-color.rasmol | 2006 May 18 11:44:14 |
stride-ebghtl---sequence logo (eps format) (pdf format) | T0293.t2k.stride-ebghtl-logo | 2006 May 18 11:44:18 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t06.dssp-ebghstl | 2006 May 18 11:44:33 |
Script for T0293.t06.dssp-ebghstl coloring in rasmol | T0293.t06.dssp-ebghstl-color.rasmol | 2006 May 18 11:44:34 |
dssp-ebghstl---sequence logo (eps format) (pdf format) | T0293.t06.dssp-ebghstl-logo | 2006 May 18 11:44:39 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t04.dssp-ebghstl | 2006 May 18 11:44:45 |
Script for T0293.t04.dssp-ebghstl coloring in rasmol | T0293.t04.dssp-ebghstl-color.rasmol | 2006 May 18 11:44:46 |
dssp-ebghstl---sequence logo (eps format) (pdf format) | T0293.t04.dssp-ebghstl-logo | 2006 May 18 11:44:50 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t2k.dssp-ebghstl | 2006 May 18 11:44:52 |
Script for T0293.t2k.dssp-ebghstl coloring in rasmol | T0293.t2k.dssp-ebghstl-color.rasmol | 2006 May 18 11:44:52 |
dssp-ebghstl---sequence logo (eps format) (pdf format) | T0293.t2k.dssp-ebghstl-logo | 2006 May 18 11:44:56 |
alpha structure prediction (rdb format) (seq format) | T0293.t06.alpha | 2006 May 18 11:45:12 |
Script for T0293.t06.alpha coloring in rasmol | T0293.t06.alpha-color.rasmol | 2006 May 18 11:45:12 |
alpha---sequence logo (eps format) (pdf format) | T0293.t06.alpha-logo | 2006 May 18 11:45:16 |
alpha structure prediction (rdb format) (seq format) | T0293.t04.alpha | 2006 May 18 11:45:22 |
Script for T0293.t04.alpha coloring in rasmol | T0293.t04.alpha-color.rasmol | 2006 May 18 11:45:24 |
alpha---sequence logo (eps format) (pdf format) | T0293.t04.alpha-logo | 2006 May 18 11:45:28 |
alpha structure prediction (rdb format) (seq format) | T0293.t2k.alpha | 2006 May 18 11:45:30 |
Script for T0293.t2k.alpha coloring in rasmol | T0293.t2k.alpha-color.rasmol | 2006 May 18 11:45:31 |
alpha---sequence logo (eps format) (pdf format) | T0293.t2k.alpha-logo | 2006 May 18 11:45:35 |
bys structure prediction (rdb format) (seq format) | T0293.t06.bys | 2006 May 18 11:45:50 |
Script for T0293.t06.bys coloring in rasmol | T0293.t06.bys-color.rasmol | 2006 May 18 11:45:51 |
bys---sequence logo (eps format) (pdf format) | T0293.t06.bys-logo | 2006 May 18 11:45:55 |
bys structure prediction (rdb format) (seq format) | T0293.t04.bys | 2006 May 18 11:46:00 |
Script for T0293.t04.bys coloring in rasmol | T0293.t04.bys-color.rasmol | 2006 May 18 11:46:01 |
bys---sequence logo (eps format) (pdf format) | T0293.t04.bys-logo | 2006 May 18 11:46:05 |
bys structure prediction (rdb format) (seq format) | T0293.t2k.bys | 2006 May 18 11:46:07 |
Script for T0293.t2k.bys coloring in rasmol | T0293.t2k.bys-color.rasmol | 2006 May 18 11:46:08 |
bys---sequence logo (eps format) (pdf format) | T0293.t2k.bys-logo | 2006 May 18 11:46:12 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t06.dssp-ehl2 | 2006 May 18 11:46:13 |
Script for T0293.t06.dssp-ehl2 coloring in rasmol | T0293.t06.dssp-ehl2-color.rasmol | 2006 May 18 11:46:14 |
dssp-ehl2---sequence logo (eps format) (pdf format) | T0293.t06.dssp-ehl2-logo | 2006 May 18 11:46:17 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t04.dssp-ehl2 | 2006 May 18 11:46:18 |
Script for T0293.t04.dssp-ehl2 coloring in rasmol | T0293.t04.dssp-ehl2-color.rasmol | 2006 May 18 11:46:19 |
dssp-ehl2---sequence logo (eps format) (pdf format) | T0293.t04.dssp-ehl2-logo | 2006 May 18 11:46:23 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t2k.dssp-ehl2 | 2006 May 18 11:46:24 |
Script for T0293.t2k.dssp-ehl2 coloring in rasmol | T0293.t2k.dssp-ehl2-color.rasmol | 2006 May 18 11:46:24 |
dssp-ehl2---sequence logo (eps format) (pdf format) | T0293.t2k.dssp-ehl2-logo | 2006 May 18 11:46:28 |
str2 structure prediction (rdb format) (seq format) | T0293.t06.str2 | 2007 Oct 13 18:29:50 |
Script for T0293.t06.str2 coloring in rasmol | T0293.t06.str2-color.rasmol | 2007 Oct 13 18:29:51 |
str2 structure prediction (rdb format) (seq format) | T0293.t04.str2 | 2006 Jun 14 10:15:05 |
Script for T0293.t04.str2 coloring in rasmol | T0293.t04.str2-color.rasmol | 2007 Oct 13 18:29:56 |
str2 structure prediction (rdb format) (seq format) | T0293.t2k.str2 | 2006 May 18 11:43:15 |
Script for T0293.t2k.str2 coloring in rasmol | T0293.t2k.str2-color.rasmol | 2006 May 18 11:43:37 |
str2---sequence logo (eps format) (pdf format) | T0293.t2k.str2-logo | 2006 May 18 11:43:41 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t06.stride-ebghtl | 2007 Oct 13 18:30:23 |
Script for T0293.t06.stride-ebghtl coloring in rasmol | T0293.t06.stride-ebghtl-color.rasmol | 2007 Oct 13 18:30:23 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t04.stride-ebghtl | 2006 May 18 11:44:07 |
Script for T0293.t04.stride-ebghtl coloring in rasmol | T0293.t04.stride-ebghtl-color.rasmol | 2006 May 18 11:44:07 |
stride-ebghtl---sequence logo (eps format) (pdf format) | T0293.t04.stride-ebghtl-logo | 2006 May 18 11:44:11 |
stride-ebghtl structure prediction (rdb format) (seq format) | T0293.t2k.stride-ebghtl | 2006 May 18 11:44:13 |
Script for T0293.t2k.stride-ebghtl coloring in rasmol | T0293.t2k.stride-ebghtl-color.rasmol | 2006 May 18 11:44:14 |
stride-ebghtl---sequence logo (eps format) (pdf format) | T0293.t2k.stride-ebghtl-logo | 2006 May 18 11:44:18 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t06.dssp-ebghstl | 2007 Oct 13 18:30:50 |
Script for T0293.t06.dssp-ebghstl coloring in rasmol | T0293.t06.dssp-ebghstl-color.rasmol | 2007 Oct 13 18:30:52 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t04.dssp-ebghstl | 2007 Oct 13 18:31:06 |
Script for T0293.t04.dssp-ebghstl coloring in rasmol | T0293.t04.dssp-ebghstl-color.rasmol | 2007 Oct 13 18:31:08 |
dssp-ebghstl structure prediction (rdb format) (seq format) | T0293.t2k.dssp-ebghstl | 2006 May 18 11:44:52 |
Script for T0293.t2k.dssp-ebghstl coloring in rasmol | T0293.t2k.dssp-ebghstl-color.rasmol | 2006 May 18 11:44:52 |
dssp-ebghstl---sequence logo (eps format) (pdf format) | T0293.t2k.dssp-ebghstl-logo | 2006 May 18 11:44:56 |
alpha structure prediction (rdb format) (seq format) | T0293.t06.alpha | 2007 Oct 13 18:31:40 |
Script for T0293.t06.alpha coloring in rasmol | T0293.t06.alpha-color.rasmol | 2007 Oct 13 18:31:41 |
alpha structure prediction (rdb format) (seq format) | T0293.t04.alpha | 2006 May 18 11:45:22 |
Script for T0293.t04.alpha coloring in rasmol | T0293.t04.alpha-color.rasmol | 2006 May 18 11:45:24 |
alpha---sequence logo (eps format) (pdf format) | T0293.t04.alpha-logo | 2006 May 18 11:45:28 |
alpha structure prediction (rdb format) (seq format) | T0293.t2k.alpha | 2006 May 18 11:45:30 |
Script for T0293.t2k.alpha coloring in rasmol | T0293.t2k.alpha-color.rasmol | 2006 May 18 11:45:31 |
alpha---sequence logo (eps format) (pdf format) | T0293.t2k.alpha-logo | 2006 May 18 11:45:35 |
bys structure prediction (rdb format) (seq format) | T0293.t06.bys | 2007 Oct 13 18:32:10 |
Script for T0293.t06.bys coloring in rasmol | T0293.t06.bys-color.rasmol | 2007 Oct 13 18:32:12 |
bys structure prediction (rdb format) (seq format) | T0293.t04.bys | 2006 May 18 11:46:00 |
Script for T0293.t04.bys coloring in rasmol | T0293.t04.bys-color.rasmol | 2006 May 18 11:46:01 |
bys---sequence logo (eps format) (pdf format) | T0293.t04.bys-logo | 2006 May 18 11:46:05 |
bys structure prediction (rdb format) (seq format) | T0293.t2k.bys | 2006 May 18 11:46:07 |
Script for T0293.t2k.bys coloring in rasmol | T0293.t2k.bys-color.rasmol | 2006 May 18 11:46:08 |
bys---sequence logo (eps format) (pdf format) | T0293.t2k.bys-logo | 2006 May 18 11:46:12 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t06.dssp-ehl2 | 2007 Oct 13 18:32:27 |
Script for T0293.t06.dssp-ehl2 coloring in rasmol | T0293.t06.dssp-ehl2-color.rasmol | 2007 Oct 13 18:32:28 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t04.dssp-ehl2 | 2007 Oct 13 18:32:34 |
Script for T0293.t04.dssp-ehl2 coloring in rasmol | T0293.t04.dssp-ehl2-color.rasmol | 2007 Oct 13 18:32:34 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.t2k.dssp-ehl2 | 2006 May 18 11:46:24 |
Script for T0293.t2k.dssp-ehl2 coloring in rasmol | T0293.t2k.dssp-ehl2-color.rasmol | 2006 May 18 11:46:24 |
dssp-ehl2---sequence logo (eps format) (pdf format) | T0293.t2k.dssp-ehl2-logo | 2006 May 18 11:46:28 |
n_notor2 structure prediction (rdb format) (seq format) | T0293.t06.n_notor2 | 2007 Oct 13 18:32:58 |
Script for T0293.t06.n_notor2 coloring in rasmol | T0293.t06.n_notor2-color.rasmol | 2007 Oct 13 18:32:59 |
n_notor2 structure prediction (rdb format) (seq format) | T0293.t04.n_notor2 | 2007 Oct 13 18:33:10 |
Script for T0293.t04.n_notor2 coloring in rasmol | T0293.t04.n_notor2-color.rasmol | 2007 Oct 13 18:33:11 |
n_notor2 structure prediction (rdb format) (seq format) | T0293.t2k.n_notor2 | 2007 Oct 13 18:33:17 |
Script for T0293.t2k.n_notor2 coloring in rasmol | T0293.t2k.n_notor2-color.rasmol | 2007 Oct 13 18:33:18 |
o_notor2 structure prediction (rdb format) (seq format) | T0293.t06.o_notor2 | 2007 Oct 13 18:33:38 |
Script for T0293.t06.o_notor2 coloring in rasmol | T0293.t06.o_notor2-color.rasmol | 2007 Oct 13 18:33:39 |
o_notor2 structure prediction (rdb format) (seq format) | T0293.t04.o_notor2 | 2007 Oct 13 18:33:47 |
Script for T0293.t04.o_notor2 coloring in rasmol | T0293.t04.o_notor2-color.rasmol | 2007 Oct 13 18:33:48 |
o_notor2 structure prediction (rdb format) (seq format) | T0293.t2k.o_notor2 | 2007 Oct 13 18:33:53 |
Script for T0293.t2k.o_notor2 coloring in rasmol | T0293.t2k.o_notor2-color.rasmol | 2007 Oct 13 18:33:53 |
n_sep structure prediction (rdb format) (seq format) | T0293.t06.n_sep | 2007 Oct 13 18:34:13 |
Script for T0293.t06.n_sep coloring in rasmol | T0293.t06.n_sep-color.rasmol | 2007 Oct 13 18:34:13 |
n_sep structure prediction (rdb format) (seq format) | T0293.t04.n_sep | 2007 Oct 13 18:34:20 |
Script for T0293.t04.n_sep coloring in rasmol | T0293.t04.n_sep-color.rasmol | 2007 Oct 13 18:34:20 |
n_sep structure prediction (rdb format) (seq format) | T0293.t2k.n_sep | 2007 Oct 13 18:34:22 |
Script for T0293.t2k.n_sep coloring in rasmol | T0293.t2k.n_sep-color.rasmol | 2007 Oct 13 18:34:23 |
o_sep structure prediction (rdb format) (seq format) | T0293.t06.o_sep | 2007 Oct 13 18:34:40 |
Script for T0293.t06.o_sep coloring in rasmol | T0293.t06.o_sep-color.rasmol | 2007 Oct 13 18:34:41 |
o_sep structure prediction (rdb format) (seq format) | T0293.t04.o_sep | 2007 Oct 13 18:34:46 |
Script for T0293.t04.o_sep coloring in rasmol | T0293.t04.o_sep-color.rasmol | 2007 Oct 13 18:34:46 |
o_sep structure prediction (rdb format) (seq format) | T0293.t2k.o_sep | 2007 Oct 13 18:34:49 |
Script for T0293.t2k.o_sep coloring in rasmol | T0293.t2k.o_sep-color.rasmol | 2007 Oct 13 18:34:49 |
dssp-ehl2 structure prediction (rdb format) (seq format) | T0293.dssp-ehl2 | 2007 Oct 13 18:34:52 |
Script for T0293.dssp-ehl2 coloring in rasmol | T0293.dssp-ehl2-color.rasmol | 2007 Oct 13 18:34:52 |
CB_burial_14_7 structure prediction (rdb format) (seq format) | T0293.t06.CB_burial_14_7 | 2007 Oct 13 18:35:04 |
Script for T0293.t06.CB_burial_14_7 coloring in rasmol | T0293.t06.CB_burial_14_7-color.rasmol | 2007 Oct 13 18:35:05 |
CB_burial_14_7 structure prediction (rdb format) (seq format) | T0293.t04.CB_burial_14_7 | 2006 May 18 11:47:01 |
Script for T0293.t04.CB_burial_14_7 coloring in rasmol | T0293.t04.CB_burial_14_7-color.rasmol | 2006 May 18 11:47:02 |
CB_burial_14_7---sequence logo (eps format) (pdf format) | T0293.t04.CB_burial_14_7-logo | 2006 May 18 11:47:07 |
CB_burial_14_7 structure prediction (rdb format) (seq format) | T0293.t2k.CB_burial_14_7 | 2006 May 18 11:47:10 |
Script for T0293.t2k.CB_burial_14_7 coloring in rasmol | T0293.t2k.CB_burial_14_7-color.rasmol | 2006 May 18 11:47:12 |
CB_burial_14_7---sequence logo (eps format) (pdf format) | T0293.t2k.CB_burial_14_7-logo | 2006 May 18 11:47:21 |
near-backbone-11 structure prediction (rdb format) (seq format) | T0293.t06.near-backbone-11 | 2007 Oct 13 18:35:22 |
Script for T0293.t06.near-backbone-11 coloring in rasmol | T0293.t06.near-backbone-11-color.rasmol | 2007 Oct 13 18:35:22 |
near-backbone-11 structure prediction (rdb format) (seq format) | T0293.t04.near-backbone-11 | 2006 May 18 11:47:49 |
Script for T0293.t04.near-backbone-11 coloring in rasmol | T0293.t04.near-backbone-11-color.rasmol | 2006 May 18 11:47:49 |
near-backbone-11---sequence logo (eps format) (pdf format) | T0293.t04.near-backbone-11-logo | 2006 May 18 11:47:53 |
near-backbone-11 structure prediction (rdb format) (seq format) | T0293.t2k.near-backbone-11 | 2006 May 18 11:47:56 |
Script for T0293.t2k.near-backbone-11 coloring in rasmol | T0293.t2k.near-backbone-11-color.rasmol | 2006 May 18 11:47:56 |
near-backbone-11---sequence logo (eps format) (pdf format) | T0293.t2k.near-backbone-11-logo | 2006 May 18 11:48:01 |