Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1t3gA/T0293-1t3gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3gA/T0293-1t3gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4365e+007.43e+00
1wmaA/T0293-1wmaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wmaA/T0293-1wmaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6247e+006.06e-03
1m93B/T0293-1m93B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m93B/T0293-1m93B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7803e+002.06e-04
1wiwA/T0293-1wiwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wiwA/T0293-1wiwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3297e+002.76e-04
1n40A/T0293-1n40A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n40A/T0293-1n40A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4620e+003.42e-03 a.104.1.1
1k7kA/T0293-1k7kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7kA/T0293-1k7kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5621e+006.28e-04 c.51.4.1
2d4pA/T0293-2d4pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0293-2d4pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8519e+003.19e-04
1wdyA/T0293-1wdyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdyA/T0293-1wdyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1461e+001.40e-02
2bd0A/T0293-2bd0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bd0A/T0293-2bd0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4933e+008.70e-03
2ci1A/T0293-2ci1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ci1A/T0293-2ci1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2318e+002.30e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001