Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mpyA/T0293-1mpyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mpyA/T0293-1mpyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9959e-011.32e-08 1mpyA d.32.1.3
d.32.1.3
1f0cA/T0293-1f0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f0cA/T0293-1f0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7604e+006.82e-04 1c8oA e.1.1.1
1wmaA/T0293-1wmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wmaA/T0293-1wmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0025e+004.37e-02
1m93B/T0293-1m93B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m93B/T0293-1m93B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1894e+002.06e-04
1wiwA/T0293-1wiwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wiwA/T0293-1wiwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4132e+002.76e-04
1qlpA/T0293-1qlpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qlpA/T0293-1qlpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3895e+002.46e-05 1ovaA e.1.1.1
2d4pA/T0293-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0293-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5210e+003.42e-04
1n5dA/T0293-1n5dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n5dA/T0293-1n5dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6364e+008.27e-02 c.2.1.2
1wdyA/T0293-1wdyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdyA/T0293-1wdyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9203e+001.40e-02
1as4A/T0293-1as4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1as4A/T0293-1as4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0286e+002.32e-05 1sek e.1.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001