# TARGET T0293 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0293.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 17 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 V 0.609 0.011 0.003 0.005 0.084 0.287 2 S 0.774 0.017 0.002 0.003 0.046 0.158 3 L 0.837 0.040 0.004 0.002 0.039 0.078 4 N 0.695 0.013 0.011 0.004 0.184 0.093 5 F 0.269 0.008 0.070 0.019 0.532 0.101 6 K 0.073 0.020 0.033 0.021 0.687 0.164 7 D 0.027 0.016 0.010 0.035 0.692 0.221 8 P 0.001 0.001 0.065 0.807 0.106 0.021 9 E 0.002 0.002 0.047 0.859 0.078 0.013 10 A 0.002 0.002 0.066 0.893 0.033 0.005 11 V 0.004 0.002 0.017 0.950 0.013 0.014 12 R 0.003 0.001 0.009 0.976 0.009 0.004 13 A 0.001 0.001 0.005 0.984 0.005 0.005 14 L 0.001 0.001 0.003 0.980 0.007 0.010 15 T 0.001 0.001 0.001 0.974 0.004 0.020 16 C 0.001 0.001 0.001 0.998 0.001 0.001 17 T 0.001 0.001 0.001 0.995 0.003 0.001 18 L 0.001 0.001 0.001 0.996 0.002 0.001 19 L 0.001 0.001 0.004 0.987 0.007 0.001 20 R 0.001 0.001 0.008 0.977 0.013 0.001 21 E 0.001 0.001 0.014 0.960 0.021 0.005 22 D 0.001 0.001 0.013 0.913 0.055 0.018 23 F 0.002 0.006 0.024 0.703 0.108 0.156 24 G 0.005 0.001 0.003 0.022 0.112 0.857 25 L 0.033 0.002 0.003 0.007 0.117 0.837 26 S 0.154 0.012 0.003 0.003 0.062 0.765 27 I 0.705 0.031 0.006 0.005 0.044 0.209 28 D 0.748 0.023 0.006 0.004 0.039 0.180 29 I 0.430 0.031 0.008 0.006 0.099 0.426 30 P 0.131 0.018 0.009 0.004 0.631 0.207 31 L 0.022 0.007 0.029 0.006 0.849 0.087 32 E 0.010 0.005 0.024 0.003 0.933 0.025 33 R 0.073 0.025 0.027 0.003 0.830 0.041 34 L 0.170 0.074 0.019 0.007 0.367 0.362 35 I 0.162 0.043 0.010 0.008 0.309 0.469 36 P 0.101 0.019 0.008 0.008 0.219 0.645 37 T 0.123 0.088 0.018 0.014 0.230 0.528 38 V 0.127 0.033 0.077 0.014 0.436 0.314 39 P 0.074 0.008 0.191 0.019 0.511 0.197 40 L 0.064 0.006 0.282 0.024 0.493 0.132 41 R 0.276 0.024 0.122 0.019 0.391 0.168 42 L 0.438 0.025 0.040 0.009 0.295 0.193 43 N 0.565 0.010 0.014 0.005 0.160 0.245 44 Y 0.836 0.009 0.010 0.005 0.069 0.071 45 I 0.900 0.003 0.003 0.004 0.024 0.066 46 H 0.961 0.002 0.001 0.002 0.009 0.026 47 W 0.909 0.005 0.001 0.002 0.015 0.067 48 V 0.516 0.014 0.001 0.003 0.031 0.434 49 E 0.029 0.003 0.001 0.002 0.041 0.923