a2m2html output for tmp.a2m

Citations (SAM, SAM-T99, HMMs)

R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1998.
A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.

Sequence numbers correspond to the following labels:

- T0293
- gi|75856563|ref|ZP_00764189.1|_94:142 COG3129: Predicted SAM-dependent methyltransferase [Vibrio sp. Ex25]
- gi|77961427|ref|ZP_00825265.1|_63:112 COG3129: Predicted SAM-dependent methyltransferase [Yersinia mollaretii ATCC 43969]
- gi|77958634|ref|ZP_00822664.1|_48:97 COG3129: Predicted SAM-dependent methyltransferase [Yersinia bercovieri ATCC 43970]
- gi|93004839|ref|YP_579276.1|_80:129 protein of unknown function DUF890 [Psychrobacter cryohalolentis K5]
- gi|92392517|gb|ABE73792.1| protein of unknown function DUF890 [Psychrobacter cryohalolentis K5]
- gi|75257595|ref|ZP_00729092.1|_42:91 COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli E22]
- gi|75238142|ref|ZP_00722146.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli F11]
- gi|75236135|ref|ZP_00720259.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli E110019]
- gi|75230650|ref|ZP_00717121.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli B7A]
- gi|75210598|ref|ZP_00710746.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli B171]
- gi|75189848|ref|ZP_00703115.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli E24377A]
- gi|75178401|ref|ZP_00698455.1| COG3129: Predicted SAM-dependent methyltransferase [Shigella boydii BS512]
- gi|82543252|ref|YP_407199.1|_69:118 hypothetical protein SBO_0697 [Shigella boydii Sb227]
- gi|74311350|ref|YP_309769.1| hypothetical protein SSO_0787 [Shigella sonnei Ss046]
- gi|81244663|gb|ABB65371.1| conserved hypothetical protein [Shigella boydii Sb227]
- gi|73854827|gb|AAZ87534.1| conserved hypothetical protein [Shigella sonnei Ss046]
- gi|83586110|ref|ZP_00924747.1|_42:91 COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli 101-1]
- gi|15830139|ref|NP_308912.1|_69:118 hypothetical protein ECs0885 [Escherichia coli O157:H7 str. Sakai]
- gi|13360344|dbj|BAB34308.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
- gi|12513803|gb|AAG55179.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
- gi|15800559|ref|NP_286571.1| hypothetical protein Z1028 [Escherichia coli O157:H7 EDL933]
- gi|90111172|ref|NP_415328.2|_42:91 predicted SAM-dependent methyltransferase [Escherichia coli K12]
- gi|89107658|ref|AP_001438.1| predicted SAM-dependent methyltransferase [Escherichia coli W3110]
- gi|87081786|gb|AAC73894.2| predicted SAM-dependent methyltransferase [Escherichia coli K12]
- gi|85674767|dbj|BAA35473.2| predicted SAM-dependent methyltransferase [Escherichia coli W3110]
- gi|3915947|sp|P75782|YBIN_ECOLI Hypothetical UPF0049 protein ybiN [Taxonomy]
- gi|75194958|ref|ZP_00705028.1| COG3129: Predicted SAM-dependent methyltransferase [Escherichia coli HS]
- gi|7466794|pir||G64817_69:118 probable membrane protein ybiN - Escherichia coli (strain K-12) [Taxonomy]
- gi|24051014|gb|AAN42392.1|_69:118 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
- gi|24112175|ref|NP_706685.1| hypothetical protein SF0758 [Shigella flexneri 2a str. 301]
- gi|30040537|gb|AAP16269.1| hypothetical protein S_0800 [Shigella flexneri 2a str. 2457T]
- gi|30062292|ref|NP_836463.1| hypothetical protein S0800 [Shigella flexneri 2a str. 2457T]
- gi|91209841|ref|YP_539827.1|_72:121 hypothetical protein YbiN [Escherichia coli UTI89]
- gi|91071415|gb|ABE06296.1| hypothetical protein YbiN [Escherichia coli UTI89]
- gi|26107181|gb|AAN79365.1|_72:121 Hypothetical protein ybiN [Escherichia coli CFT073]
- gi|26246782|ref|NP_752822.1| Hypothetical protein ybiN [Escherichia coli CFT073]
- gi|77977260|ref|ZP_00832714.1|_74:123 COG3129: Predicted SAM-dependent methyltransferase [Yersinia intermedia ATCC 29909]
- gi|88857082|ref|ZP_01131725.1|_46:94 putative S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas tunicata D2]
- gi|88820279|gb|EAR30091.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas tunicata D2]
- gi|77973877|ref|ZP_00829421.1|_63:112 COG3129: Predicted SAM-dependent methyltransferase [Yersinia frederiksenii ATCC 33641]
- gi|71037574|gb|AAZ17882.1|_63:112 probable SAM-dependent methyltransferase [Psychrobacter arcticus 273-4]
- gi|71064589|ref|YP_263316.1| probable SAM-dependent methyltransferase [Psychrobacter arcticus 273-4]
- gi|95112403|emb|CAK17130.1|_41:90 conserved hypothetical protein [Pseudomonas entomophila L48]
- gi|60493824|emb|CAH08615.1|_41:90 conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
- gi|60682390|ref|YP_212534.1| hypothetical protein BF2920 [Bacteroides fragilis NCTC 9343]
- gi|77381215|gb|ABA72728.1|_65:114 Protein of unknown function DUF890 [Pseudomonas fluorescens PfO-1]
- gi|77457212|ref|YP_346717.1| Protein of unknown function DUF890 [Pseudomonas fluorescens PfO-1]
- gi|21958466|gb|AAM85237.1|_63:112 hypothetical protein y1668 [Yersinia pestis KIM]
- gi|15980512|emb|CAC91323.1| conserved hypothetical protein [Yersinia pestis CO92]
- gi|22125563|ref|NP_668986.1| hypothetical protein y1668 [Yersinia pestis KIM]
- gi|16122739|ref|NP_406052.1| hypothetical protein YPO2519 [Yersinia pestis CO92]
- gi|89105719|ref|ZP_01178233.1| COG3129: Predicted SAM-dependent methyltransferase [Yersinia pestis biovar Orientalis str. IP275]
- gi|45436984|gb|AAS62537.1|_63:112 Predicted SAM-dependent methyltransferases [Yersinia pestis biovar Medievalis str. 91001]
- gi|51590154|emb|CAH21791.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953]
- gi|51596872|ref|YP_071063.1| hypothetical protein YPTB2553 [Yersinia pseudotuberculosis IP 32953]
- gi|45442121|ref|NP_993660.1| Predicted SAM-dependent methyltransferase [Yersinia pestis biovar Medievalis str. 91001]
- gi|77629605|ref|ZP_00792191.1| COG3129: Predicted SAM-dependent methyltransferase [Yersinia pseudotuberculosis IP 31758]
- gi|77636604|ref|ZP_00798677.1|_63:112 COG3129: Predicted SAM-dependent methyltransferase [Yersinia pestis Angola]
- gi|88795517|ref|ZP_01111212.1|_23:72 hypothetical protein MADE_04271 [Alteromonas macleodii 'Deep ecotype']
- gi|88773096|gb|EAR04366.1| hypothetical protein MADE_04271 [Alteromonas macleodii 'Deep ecotype']
- gi|71908488|ref|YP_286075.1|_35:84 Protein of unknown function DUF890 [Dechloromonas aromatica RCB]
- gi|71848109|gb|AAZ47605.1| Protein of unknown function DUF890 [Dechloromonas aromatica RCB]
- gi|77814335|ref|ZP_00813595.1|_82:131 Protein of unknown function DUF890 [Shewanella putrefaciens CN-32]
- gi|77810606|gb|EAO94984.1| Protein of unknown function DUF890 [Shewanella putrefaciens CN-32]
- gi|82740238|ref|ZP_00902980.1| conserved hypothetical protein [Shewanella sp. W3-18-1]
- gi|82722352|gb|EAP57176.1| conserved hypothetical protein [Shewanella sp. W3-18-1]
- gi|82735952|ref|ZP_00898813.1|_42:91 conserved hypothetical protein [Pseudomonas putida F1]
- gi|82716939|gb|EAP51992.1| conserved hypothetical protein [Pseudomonas putida F1]
- gi|26987712|ref|NP_743137.1|_42:91 hypothetical protein PP0976 [Pseudomonas putida KT2440]
- gi|24982399|gb|AAN66601.1| conserved hypothetical protein [Pseudomonas putida KT2440]
- gi|84387363|ref|ZP_00990383.1|_153:201 hypothetical protein V12B01_04948 [Vibrio splendidus 12B01]
- gi|84377812|gb|EAP94675.1| hypothetical protein V12B01_04948 [Vibrio splendidus 12B01]
- gi|86146780|ref|ZP_01065100.1|_154:202 hypothetical protein MED222_15579 [Vibrio sp. MED222]
- gi|85835430|gb|EAQ53568.1| hypothetical protein MED222_15579 [Vibrio sp. MED222]
- gi|86140167|ref|ZP_01058729.1|_41:90 putative S-adenosyl-L-methionine-dependent methyltransferase [Roseobacter sp. MED193]
- gi|85823104|gb|EAQ43317.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Roseobacter sp. MED193]
- gi|71555523|gb|AAZ34734.1|_77:126 Predicted SAM-dependent methyltransferases [Pseudomonas syringae pv. phaseolicola 1448A]
- gi|71734970|ref|YP_273419.1| Predicted SAM-dependent methyltransferase [Pseudomonas syringae pv. phaseolicola 1448A]
- gi|52217233|dbj|BAD49826.1|_41:90 conserved hypothetical protein [Bacteroides fragilis YCH46]
- gi|53714368|ref|YP_100360.1| hypothetical protein BF3081 [Bacteroides fragilis YCH46]
- gi|83943756|ref|ZP_00956214.1|_41:90 putative S-adenosyl-L-methionine-dependent methyltransferase [Sulfitobacter sp. EE-36]
- gi|83845436|gb|EAP83315.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Sulfitobacter sp. EE-36]
- gi|83955232|ref|ZP_00963887.1|_41:90 putative S-adenosyl-L-methionine-dependent methyltransferase [Sulfitobacter sp. NAS-14.1]
- gi|83840225|gb|EAP79399.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Sulfitobacter sp. NAS-14.1]
- gi|50904849|ref|XP_463913.1|_53:101 SAM-dependent methyltransferase-like protein [Oryza sativa (japonica cultivar-group)]
- gi|51963820|ref|XP_506693.1| PREDICTED OSJNBb0088N06.22 gene product [Oryza sativa (japonica cultivar-group)]
- gi|41052744|dbj|BAD07600.1| SAM-dependent methyltransferase-like protein [Oryza sativa (japonica cultivar-group)]
- gi|41052631|dbj|BAD08140.1| SAM-dependent methyltransferase-like protein [Oryza sativa (japonica cultivar-group)]
- gi|59714336|ref|YP_207111.1|_47:96 methyltransferase [Vibrio fischeri ES114]
- gi|59482584|gb|AAW88223.1| methyltransferase [Vibrio fischeri ES114]
- gi|87121754|ref|ZP_01077641.1|_53:102 hypothetical SAM-dependent methyltransferase [Marinomonas sp. MED121]
- gi|86163005|gb|EAQ64283.1| hypothetical SAM-dependent methyltransferase [Marinomonas sp. MED121]
- gi|63255045|gb|AAY36141.1|_61:110 Protein of unknown function DUF890 [Pseudomonas syringae pv. syringae B728a]
- gi|66044338|ref|YP_234179.1| Protein of unknown function DUF890 [Pseudomonas syringae pv. syringae B728a]
- gi|16764188|ref|NP_459803.1|_42:91 putative SAM-dependent methyltransferase [Salmonella typhimurium LT2]
- gi|16419332|gb|AAL19762.1| putative SAM-dependent methyltransferase [Salmonella typhimurium LT2]
- gi|56128331|gb|AAV77837.1|_42:91 putative SAM-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
- gi|56414074|ref|YP_151149.1| putative SAM-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
- gi|67153802|ref|ZP_00415547.1|_66:115 Protein of unknown function DUF890 [Azotobacter vinelandii AvOP]
- gi|67087935|gb|EAM07401.1| Protein of unknown function DUF890 [Azotobacter vinelandii AvOP]
- gi|70728444|ref|YP_258193.1|_98:147 hypothetical protein PFL_1062 [Pseudomonas fluorescens Pf-5]
- gi|68342743|gb|AAY90349.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
- gi|68541324|ref|ZP_00581069.1|_100:149 Protein of unknown function DUF890 [Shewanella baltica OS155]
- gi|68520977|gb|EAN44476.1| Protein of unknown function DUF890 [Shewanella baltica OS155]
- gi|49087744|gb|AAT51492.1|_53:102 PA3840 [synthetic construct]
- gi|53728253|ref|ZP_00137263.2|_66:115 COG3129: Predicted SAM-dependent methyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
- gi|9950016|gb|AAG07227.1|_53:102 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
- gi|15599035|ref|NP_252529.1| hypothetical protein PA3840 [Pseudomonas aeruginosa PAO1]
- gi|84325570|ref|ZP_00973605.1| COG3129: Predicted SAM-dependent methyltransferase [Pseudomonas aeruginosa 2192]
- gi|69951976|ref|ZP_00639588.1|_77:126 Protein of unknown function DUF890 [Shewanella frigidimarina NCIMB 400]
- gi|69164627|gb|EAN73687.1| Protein of unknown function DUF890 [Shewanella frigidimarina NCIMB 400]
- gi|76791427|ref|ZP_00773933.1|_60:109 Protein of unknown function DUF890 [Pseudoalteromonas atlantica T6c]
- gi|76593109|gb|EAO69293.1| Protein of unknown function DUF890 [Pseudoalteromonas atlantica T6c]
- gi|48856096|ref|ZP_00310254.1|_50:99 COG3129: Predicted SAM-dependent methyltransferase [Cytophaga hutchinsonii]
- gi|54302571|ref|YP_132564.1|_49:98 hypothetical SAM-dependent methyltransferase [Photobacterium profundum SS9]
- gi|46915993|emb|CAG22764.1| hypothetical SAM-dependent methyltransferase [Photobacterium profundum SS9]
- gi|90412625|ref|ZP_01220627.1|_61:110 hypothetical SAM-dependent methyltransferase [Photobacterium profundum 3TCK]
- gi|90326433|gb|EAS42845.1| hypothetical SAM-dependent methyltransferase [Photobacterium profundum 3TCK]
- gi|68544986|ref|ZP_00584537.1|_55:104 Protein of unknown function DUF890 [Shewanella amazonensis SB2B]
- gi|68516854|gb|EAN40564.1| Protein of unknown function DUF890 [Shewanella amazonensis SB2B]
- gi|71148077|gb|AAZ28550.1|_37:85 conserved hypothetical protein [Colwellia psychrerythraea 34H]
- gi|71282337|ref|YP_268988.1| hypothetical protein CPS_2268 [Colwellia psychrerythraea 34H]
- gi|84319404|ref|ZP_00967801.1|_53:102 COG3129: Predicted SAM-dependent methyltransferase [Pseudomonas aeruginosa C3719]
- gi|76877120|emb|CAI89337.1|_82:131 putative S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas haloplanktis TAC125]
- gi|77362209|ref|YP_341783.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas haloplanktis TAC125]
- gi|82495854|ref|ZP_00881427.1|_87:136 conserved hypothetical protein [Shewanella sp. MR-4]
- gi|82406159|gb|EAP46826.1| conserved hypothetical protein [Shewanella sp. MR-4]
- gi|78685453|ref|ZP_00850231.1|_87:136 conserved hypothetical protein [Shewanella sp. ANA-3]
- gi|78506831|gb|EAP20346.1| conserved hypothetical protein [Shewanella sp. ANA-3]
- gi|90019953|ref|YP_525780.1|_50:99 A/G-specific adenine glycosylase MutY [Saccharophagus degradans 2-40]
- gi|89949553|gb|ABD79568.1| A/G-specific adenine glycosylase MutY [Saccharophagus degradans 2-40]
- gi|24371734|ref|NP_715776.1|_19:68 hypothetical protein SO0134 [Shewanella oneidensis MR-1]
- gi|24345517|gb|AAN53221.1| conserved hypothetical protein [Shewanella oneidensis MR-1]
- gi|86133826|ref|ZP_01052408.1|_40:89 putative S-adenosyl-L-methionine-dependent methyltransferase [Tenacibaculum sp. MED152]
- gi|85820689|gb|EAQ41836.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Tenacibaculum sp. MED152]
- gi|73967244|ref|XP_537774.2|_42:90 PREDICTED: similar to Hypothetical UPF0049 protein ZK1128.2 in chromosome III isoform 1 [Canis familiaris]
- gi|73967246|ref|XP_868505.1|_42:90 PREDICTED: similar to Hypothetical UPF0049 protein ZK1128.2 in chromosome III isoform 2 [Canis familiaris]
- gi|42569208|ref|NP_179703.2|_50:98 unknown protein [Arabidopsis thaliana]
- gi|55733759|gb|AAV59276.1| At2g21070 [Arabidopsis thaliana]
- gi|53850469|gb|AAU95411.1| At2g21070 [Arabidopsis thaliana]
- gi|79322590|ref|NP_001031382.1|_50:98 unknown protein [Arabidopsis thaliana]
- gi|52354261|gb|AAU44451.1|_50:98 hypothetical protein AT2G21070 [Arabidopsis thaliana]
- gi|71896227|ref|NP_001026773.1|_42:90 hypothetical protein LOC431184 [Gallus gallus]
- gi|53136428|emb|CAG32543.1| hypothetical protein [Gallus gallus]
- gi|84779417|dbj|BAE74194.1|_102:151 conserved hypothetical protein [Sodalis glossinidius str. 'morsitans']
- gi|85058897|ref|YP_454599.1| hypothetical protein SG0919 [Sodalis glossinidius str. 'morsitans']
- gi|50417838|gb|AAH78220.1|_42:90 Hypothetical protein LOC445217 [Danio rerio]
- gi|57525677|ref|NP_001003611.1| hypothetical protein LOC445217 [Danio rerio]
- gi|55644871|ref|XP_523533.1|_154:202 PREDICTED: similar to MGC3329 protein [Pan troglodytes]
- gi|74202960|dbj|BAE26189.1|_42:90 unnamed protein product [Mus musculus]
- gi|12848120|dbj|BAB27835.1|_42:90 unnamed protein product [Mus musculus]
- gi|56205951|emb|CAI24379.1|_42:90 novel protein [Mus musculus]
- gi|56205387|emb|CAI24250.1| novel protein [Mus musculus]
- gi|74216910|dbj|BAE26574.1| unnamed protein product [Mus musculus]
- gi|74222968|dbj|BAE40630.1| unnamed protein product [Mus musculus]
- gi|12849683|dbj|BAB28440.1| unnamed protein product [Mus musculus]
- gi|32451971|gb|AAH54724.1| Hypothetical protein LOC67493 [Mus musculus]
- gi|29436824|gb|AAH49897.1| Hypothetical protein LOC67493 [Mus musculus]
- gi|21312938|ref|NP_080473.1| hypothetical protein LOC67493 [Mus musculus]
- gi|62656526|ref|XP_340845.2|_42:90 PREDICTED: similar to RIKEN cDNA 2810013M15 [Rattus norvegicus]
- gi|67967559|dbj|BAE00262.1|_42:90 unnamed protein product [Macaca fascicularis]
- gi|56205950|emb|CAI24378.1|_42:90 novel protein [Mus musculus]
- gi|56205388|emb|CAI24251.1| novel protein [Mus musculus]
- gi|29791720|gb|AAH50603.1|_42:90 METT10D protein [Homo sapiens]
- gi|76643676|ref|XP_586212.2|_42:90 PREDICTED: similar to CG7544-PA [Bos taurus]
- gi|31873510|emb|CAD89999.2|_42:90 hypothetical protein [Homo sapiens]
- gi|12654743|gb|AAH01213.1|_42:90 METT10D protein [Homo sapiens]
- gi|14042068|dbj|BAB55094.1|_42:90 unnamed protein product [Homo sapiens]
- gi|21362066|ref|NP_076991.2| hypothetical protein LOC79066 [Homo sapiens]
- gi|88802722|ref|ZP_01118249.1|_40:89 putative S-adenosyl-L-methionine-dependent methyltransferase [Polaribacter irgensii 23-P]
- gi|88781580|gb|EAR12758.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Polaribacter irgensii 23-P]
- gi|49257234|gb|AAH71096.1|_42:90 MGC81116 protein [Xenopus laevis]
- gi|47212445|emb|CAG11398.1|_42:90 unnamed protein product [Tetraodon nigroviridis]
- gi|91095139|ref|XP_973052.1|_41:89 PREDICTED: similar to Hypothetical UPF0049 protein ZK1128.2 in chromosome III [Tribolium castaneum]
- gi|86130355|ref|ZP_01048955.1|_35:84 methyltransferase [Cellulophaga sp. MED134]
- gi|85819030|gb|EAQ40189.1| methyltransferase [Cellulophaga sp. MED134]
- gi|66560989|ref|XP_624889.1|_41:89 PREDICTED: similar to Zgc:100981 [Apis mellifera]
- gi|19115526|ref|NP_594614.1|_14:62 hypothetical protein SPAC27D7.08c [Schizosaccharomyces pombe 972h-]
- gi|4539588|emb|CAA15827.2| SPAC27D7.08c [Schizosaccharomyces pombe]
- gi|24817627|emb|CAA87421.2|_42:90 Hypothetical protein ZK1128.2a [Caenorhabditis elegans]
- gi|32564931|ref|NP_499247.2| ZK1128.2a [Caenorhabditis elegans]
- gi|29840843|sp|Q09357|YS02_CAEEL Hypothetical UPF0049 protein ZK1128.2 in chromosome III [Taxonomy]
- gi|24817626|emb|CAD54175.1|_42:90 Hypothetical protein ZK1128.2b [Caenorhabditis elegans]
- gi|32564933|ref|NP_871660.1| ZK1128.2b [Caenorhabditis elegans]
- gi|50259505|gb|EAL22178.1|_36:85 hypothetical protein CNBC3160 [Cryptococcus neoformans var. neoformans B-3501A]
- gi|57225872|gb|AAW42333.1|_36:85 conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
- gi|58264968|ref|XP_569640.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
- gi|72054094|ref|XP_793611.1|_42:90 PREDICTED: similar to CG7544-PA [Strongylocentrotus purpuratus]
- gi|66820304|ref|XP_643782.1|_77:125 hypothetical protein DDB0203108 [Dictyostelium discoideum]
- gi|60471928|gb|EAL69882.1| hypothetical protein DDBDRAFT_0203108 [Dictyostelium discoideum AX4]
- gi|28829833|gb|AAO52335.1|_57:105 similar to ZK1128.2.p [Caenorhabditis elegans] [Dictyostelium discoideum]
- gi|39590668|emb|CAE65038.1|_42:90 Hypothetical protein CBG09879 [Caenorhabditis briggsae]
- gi|55234795|gb|EAA00148.2|_41:89 ENSANGP00000021275 [Anopheles gambiae str. PEST]
- gi|58394283|ref|XP_320636.2| ENSANGP00000021275 [Anopheles gambiae str. PEST]
- gi|56753878|gb|AAW25136.1|_42:90 SJCHGC03211 protein [Schistosoma japonicum]
- gi|4803936|gb|AAD29809.1|_50:125 unknown protein [Arabidopsis thaliana]
- gi|32398781|emb|CAD98491.1|_48:95 conserved hypothetical protein [Cryptosporidium parvum]
- gi|66475492|ref|XP_627562.1| YbiN-like RNA methylase (NPPY variety; HemK family) [Cryptosporidium parvum Iowa II]
- gi|46229013|gb|EAK89862.1| YbiN-like RNA methylase (NPPY variety; HemK family) [Cryptosporidium parvum]
- gi|19922302|ref|NP_611015.1|_47:95 CG7544-PA [Drosophila melanogaster]
- gi|16185375|gb|AAL13909.1| LD39460p [Drosophila melanogaster]
- gi|21627173|gb|AAF58169.2| CG7544-PA [Drosophila melanogaster]
- gi|54635817|gb|EAL25220.1|_45:93 GA20428-PA [Drosophila pseudoobscura]

                         10        20               30        40       
                         |         |                |         |       
   1 ...V...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
   2 ge.D...S...I..NFSDPNAVKMLNKALLAAYYGI.EfW.....DIPDTYLCPPIPGRADYI.H
   3 ygdI...S...I..DFADPLAVKMLNRALLKHFYGI.EyW.....DIPADFLCPPIPGRADYI.H
   4 ygdI...S...V..DFADPLAVKMLNRALLKHFYGI.EyW.....DIPADFLCPPIPGRADYI.H
   5 kgeS...T...I..NFSDSAAVRVLNQALLANYYGV.KfW.....DIPEGYLCPPIPGRADYI.H
   6 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
   7 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
   8 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
   9 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  10 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  11 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  12 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  13 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  14 ageQ...S...V..DFANPLAVKALNKALLAHFYAVaN.W.....DIPDGFLCPPVPGRADYI.H
  15 ygdI...S...I..DFADPLAVKMLNRALLKHFYGI.EyW.....DIPADFLCPPIPGRADYV.H
  16 qq.D...T...I..DFSDPQAVKMLNKALLMHHYGI.EfW.....DIPETYLCPPIPGRVDYL.H
  17 ygdI...S...I..DFADPLAVKMLNKALLKHFYGI.EyW.....DIPADFLCPPIPGRADYV.H
  18 kgeP...T...I..NFSDSAAVRVLNQALLAHYYGV.KfW.....DIPEGYLCPPIPGRADYI.H
  19 ygkP...S...I..DFANPEAVRVFNRALLKAQYGV.QhW.....DIPADYLCPPIPGRADYI.H
  20 ygtT...S...I..DFFNPRAVKALNKALLISYYGI.RyW.....DIPKNYLCPPIPGRADYI.H
  21 ygkE...S...I..DFASPDAVRVFNRALLKSFYGI.QhW.....DIPADYLCPPVPGRADYI.H
  22 ygdI...S...V..DFADPLAVKMLNKALLKHFYGI.EyW.....DIPADSLCPPIPGRADYV.H
  23 ygdI...S...V..DFADPLAVKMLNKALLKHFYGI.EyW.....DIPADSLCPPIPGRADYV.H
  24 ygdI...S...V..DFADPLAVKMLNKALLKHFYGI.EyW.....DIPADSLCPPIPGRADYV.H
  25 sgkT...S...I..DFTNPNAVKALNAALLFHYYKL.EyW.....DMPEGYLCPPVPGRADYI.H
  26 agtA...S...I..DFANPAAVKMLNRAILMHHYGV.KgW.....DIPAGYLCPPIPGRADYI.H
  27 fggL...S...I..DFADPEAVKTLNTALLKHHYGI.DfW.....DIPKGALCPPIPGRVDYL.H
  28 hgkP...S...I..DFANPEAVRVFNRALLKAQYGI.QhW.....DIPADYLCPPIPGRADYI.H
  29 hgkP...S...I..DFANPEAVRVFNRALLKAQYGI.QhW.....DIPADYLCPPIPGRADYI.H
  30 ge.D...T...I..NFSDPLAVKLLNKALLAHHYGV.KhW.....DIPAGYLCPPIPGRADYI.H
  31 ge.D...T...I..NFSDPLAVKLLNKALLAHHYGV.KhW.....DIPAGYLCPPIPGRADYI.H
  32 agrS...T...I..DFQDVNAVRMLNRALLKAHYDI.DfW.....DIPDGYLCPAIPGRVDYI.H
  33 ygkE...S...I..DFADPQAVRVFNRALLKAFYGIaH.W.....DIPADYLCPPIPGRADYL.H
  34 ygtT...S...I..DFFNPRAVKALNKALLISCYGI.RyW.....DIPKNYLCPPIPGRADYI.H
  35 agqT...T...I..DFRDVAAVRMLNRALLKADYGI.DfW.....DIPPNYLCPPIPGRVDYI.H
  36 agqT...T...I..DFRDVAAVRMLNRALLKADYGI.DfW.....DIPPNYLCPPIPGRVDYI.H
  37 ggrA...S...I..DFTDFAATRELTRVLLLHDHGV.N.W.....WIPDGQLCPTVPNRSNYI.H
  38 ygnE...S...I..NFSDPQAVKALNKALLAHFYNV.PfW.....DIPQGYLCPPIPGRADYI.H
  39 fgnE...S...I..DFADADAVKALNRALLNHFYGV.SfW.....DIPPGYLCPPIPGRADYI.H
  40 ygkE...S...I..DFANPQAVRVFNRALLKAFYGIaH.W.....DIPADYLCPPIPGRADYL.H
  41 ageQ...S...V..DFANPQAVKALNKALLAHFYAV.ThW.....DIPPGFLCPPVPGRADYI.H
  42 ageQ...S...V..DFANPQAVKALNKALLAHFYAV.ThW.....DIPPGFLCPPVPGRADYI.H
  43 ygkR...S...I..DFADPEAVKALNRALLAEHYGI.RqW.....DIPPGYLCPPIPGRADYL.H
  44 ygkE...S...I..DFADPAAVRVFNRALLKAFYGIaH.W.....DIPADFLCPPVPGRADYV.H
  45 ygtL...S...I..DFADPLAVKTLNAALLKHHYGI.GaW.....DIPQGALCPPIPGRVDYV.H
  46 ygrQ...S...I..DFADPAAVKAFNRALLQQFYDV.ReW.....DIPDGYLCPPIPGRADYL.H
  47 ygrQ...S...I..DFADPAAVKAFNRALLQQFYDV.ReW.....DIPDGYLCPPIPGRADYL.H
  48 ygrQ...S...I..DFADPAAVKAFNRALLQQFYDV.ReW.....DIPDGYLCPPIPGRADYL.H
  49 ygnP...S...I..DFADPKAVKSLNAALLLSEYHI.NgW.....DIPEGYLCPPVPGRVDYL.H
  50 sgqQ...S...I..DFSKAASVKALNAALLIHYYGL.NmW.....DIPEGYLCPPVPGRADYI.H
  51 yndQ...S...I..DFFNPAAVLCLNQALLKHYYGI.DeW.....NIPEGYLCPPIPGRADYI.H
  52 fgdL...S...V..DFSDPAAVKMLNKALLHHFYNV.EnW.....DIPPGYLCPPIPGRADYI.H
  53 fgdL...S...V..DFSDPAAVKMLNKALLHHFYNV.EnW.....DIPPGYLCPPIPGRADYI.H
  54 ygnL...S...I..DFALPEAVKALNCALLKHHYGI.SrW.....DIPKGFLCPPIPGRVDYL.H
  55 nq.D...T...I..DFANPQAVKALNLSLLKSEYHV.KfW.....DIPDGYLCPAIPGRVDYI.H
  56 ygrQ...S...I..DFADPAAVKAFNRALLQQFYDV.ReW.....NIPDGYLCPPIPGRADYL.H
  57 agtK...S...I..DFSDNKAVKTLNQALLKAHYNV.DfW.....DIPQHNLCPPIPGRVDYI.H
  58 ygdL...S...I..DFADPSAVKTLNAALLQHHYGL.AfW.....DIPKGALCPPIPGRVDYL.H
  59 ygaL...S...I..DFADPFAVKNLNAALLKHHYGL.AfW.....DIPKGALCPPIPGRVDYL.H
  60 ...VgaaT...I..DFANSAAVKALNTALLQHHYKI.EsW.....SIPDGALCPPIPGRIDYI.H
  61 ygaL...S...I..DFADPLAVKNLNAALLKQHYQI.DfW.....DIPKGALCPPIPGRVDYV.H
  62 ynsI...T...I..DFSNPQAVKELNKALLFTYKNI.SvW.....DFPDENLCPPIPGRLDYI.H
  63 sgrV...S...L..NFKDPEAVRALTCTLLKEDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  64 sgrV...S...L..NFKDPEAVRALTCTLLKEDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  65 gsrA...R...I..DWTDYNATRELTRVLLLHDHGV.N.W.....WIPDGQLCPTVPNRSNYI.H
  66 gsrA...R...I..DWTDYNATRELTRVLLLHDHGV.N.W.....WIPDGQLCPTVPNRSNYI.H
  67 gsrA...R...I..DWTDYNATRELTRVLLLHDHGV.N.W.....WIPDGQLCPTVPNRSNYI.H
  68 agrV...S...L..NFKDPEAVRALTCTLLKEDFGL.T.I.....DIPLERLIPTVPLRLNYI.H
  69 agtP...S...V..DFASPAAVTQLNRTLLLHDYGL.RhW.....DIPAGFLCPPVPGRPDYL.H
  70 tgrV...T...L..NFKDPEAVRALTCTLLKEDFGL.T.I.....EIPLERLIPTVPLRLNYI.H
  71 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  72 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  73 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  74 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  75 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  76 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  77 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  78 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  79 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  80 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  81 ngrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  82 dgrV...S...L..NFKDPEAVRALTCTLLREDFGL.S.I.....DIPLERLIPTVPLRLNYI.H
  83 fdvI...T...I..DFSNPEAVKELNKALLFSYDKV.TtW.....DFPKENLCPPIPGRLDYV.H
  84 agrV...S...L..NFKDPCAVRALTCTLLKEDFGL.T.I.....DIPLERLIPTVPLRLNYI.H
  85 ...T...GrlvV..NFKEPEAVRALTCTLLKEDFGL.T.I.....QIPLERLIPTVPLRLNYI.H
  86 sgkV...T...I..DFKNVGALRALTCTLLKKDFDL.N.I.....EIPPGKLIPTIPLRLNYI.L
  87 rgiQ...T...I..DFSNPKAVLELNRAILLNDYSL.N.Wy....DIPEGYLAPAIPGRADYI.L
  88 tgkI...K...I..DFKNEESLRVLTEVLLKHDFNL.E.V.....KIPPNKLVPTLPLRINYI.L
  89 ...VkngR...I..DFWNEDAIRTLGKAILDRDYSL.R.V.....EFPENRLCPMVPNRATYI.R
  90 ngkV...T...F..DFKKDAAVRCLTQTLLKKDFNL.D.V.....EIPPGHLVPRVPQKLNYC.L
  91 ngkV...T...F..DFKKDAAVRCLTQTLLKKDFNL.D.V.....EIPPGHLVPRVPQKLNYC.L
  92 dgyT...S...I..NFQDPTALRELTKCLLKEDWNL.D.V.....DLREDRLCPTIPNRLDYIyH
  93 dgyT...S...I..NFQDPTALRELTKCLLKEDWNL.D.V.....DLREDRLCPTIPNRLDYIyH
  94 agkA...T...L..DFHDSESLRSLTCTLLKEDFGL.E.V.....ELPLDRLIPTLSLRLNYI.H
  95 ekiY...N...I..DWKDSNATKELTRVLLDHDFGL.R.I.....ELPDNYLCPTLTLRINYL.Y
  96 n..F...K...LlaNWKDSNATKELTRVLLDHDFGL.R.I.....ELPDNYLCPTLTLRINYL.Y
  97 ngkV...T...L..DFRKDAAVRCLTQTLLKKDFSL.N.V.....NLPAGHLVPRVPQKLNYC.L
  98 agkV...R...L..DYRNKRAVHLLSKCLLLRDFGL.K.L.....ELPPDKLVPTLPLRLNYI.H
  99 cgrV...M...L..DFRTPSHLAALSKALLMKDFGL.N.V.....NFPSDRLIPTVPLRLNYI.L
 100 gsrA...R...I..DWTDYNATRELTRVLLLHDHGV.N.Wy27yrWIPDGQLCPTVPNRSNYI.H
 101 nnkV...R...I..NY-NPAALHCISKVLLHYRYNI.N.W.....DIPDKFLIPTIPSRANYV.H
 102 ngkV...S...V..NFRNEKTLRELTKMLLKEYYDL.D.V.....DFAPGSLVPTLALRLNYI.L
 103 tgkV...S...V..NFRNEKTLRELSKMLLKEYFEL.D.V.....DFAPGSLVPTLALRLNYI.L


            
           
   1 WVE...
   2 RVAell
   3 HLAdll
   4 HLAdll
   5 YIAdll
   6 HLAdll
   7 HLAdll
   8 HLAdll
   9 HLAdll
  10 HLAdll
  11 HLAdll
  12 HLAdll
  13 HLAdll
  14 HLAdll
  15 HLAdll
  16 YLAdll
  17 HLAdll
  18 YIAdll
  19 VLAdll
  20 YIAdli
  21 FLAdll
  22 HLAdll
  23 HLAdll
  24 HLAdll
  25 GIAdll
  26 SVAdll
  27 YLAdll
  28 VAAdll
  29 VAAdll
  30 RVAdil
  31 RVAdil
  32 YLAdll
  33 FLAdll
  34 YIAdli
  35 HLAdll
  36 HLAdll
  37 WIEdll
  38 NIAdll
  39 HLAdll
  40 FLAdll
  41 HLAdll
  42 HLAdll
  43 GLAdll
  44 FLAdll
  45 YVAdll
  46 YLAdll
  47 YLAdll
  48 YLAdll
  49 YIAdll
  50 GLAdll
  51 NIAall
  52 HIAdll
  53 HIAdll
  54 HLEdll
  55 HLQdll
  56 YLAdll
  57 YLAdll
  58 YLAdll
  59 YLAdll
  60 YIAell
  61 YLAdll
  62 HLSdll
  63 WVEdli
  64 WVEdli
  65 WINdll
  66 WINdll
  67 WINdll
  68 WVEdli
  69 HLAdll
  70 WVEdli
  71 WVEdli
  72 WVEdli
  73 WVEdli
  74 WVEdli
  75 WVEdli
  76 WVEdli
  77 WVEdli
  78 WVEdli
  79 WVEdli
  80 WVEdli
  81 WVEdli
  82 WVEdli
  83 YLSdli
  84 WVEdli
  85 WVEdli
  86 WLEdll
  87 YLKdfl
  88 WIEdlm
  89 YIHdll
  90 LIDdll
  91 LIDdll
  92 VLDlep
  93 VLDlep
  94 WIEdll
  95 WISdql
  96 WISdql
  97 LIDdil
  98 WLEdig
  99 WLEdli
 100 WINdll
 101 FISdll
 102 WLEdlm
 103 WLEdml