Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0162e-143.51e-81 c.66.1.30
1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4625e-133.30e-67 1dusA c.66.1.4
1jg1A/T0293-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0293-1jg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3858e-101.23e-57 c.66.1.7
1o54A/T0293-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o54A/T0293-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5390e-101.05e-69 c.66.1.13
1dl5A/T0293-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0293-1dl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4539e-101.03e-61 1dl5A c.66.1.7
d.197.1.1
1f3lA/T0293-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f3lA/T0293-1f3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0416e-103.10e-52 1g6q2 c.66.1.6
1im8A/T0293-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1im8A/T0293-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2693e-097.32e-65 c.66.1.14
1g38A/T0293-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g38A/T0293-1g38A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5406e-093.34e-49 2admA c.66.1.27
1ne2A/T0293-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne2A/T0293-1ne2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5488e-092.14e-50 c.66.1.32
1sqgA/T0293-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0293-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8222e-091.22e-49 a.79.1.3
c.66.1.38

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001