Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nv8A/T0293-1nv8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nv8A/T0293-1nv8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3334e-161.60e-76 c.66.1.30
1dusA/T0293-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0293-1dusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7799e-119.59e-59 1dusA c.66.1.4
2as0A/T0293-2as0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0293-2as0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5137e-101.97e-54
1l3iA/T0293-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0293-1l3iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5142e-092.34e-53 c.66.1.22
1ufkA/T0293-1ufkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufkA/T0293-1ufkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1108e-091.25e-49 c.66.1.39
1wxxA/T0293-1wxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxxA/T0293-1wxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0626e-091.50e-46
1wznA/T0293-1wznA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0293-1wznA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2889e-087.58e-50
1wy7A/T0293-1wy7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy7A/T0293-1wy7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6569e-081.59e-45
1jg1A/T0293-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0293-1jg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8456e-088.23e-45 c.66.1.7
1ne2A/T0293-1ne2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne2A/T0293-1ne2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8597e-081.17e-41 c.66.1.32

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001