Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vl5A/T0293-1vl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0293-1vl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7592e-164.90e-76 c.66.1.41
1xxlA/T0293-1xxlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0293-1xxlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8187e-169.00e-74
1l3iA/T0293-1l3iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0293-1l3iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2788e-162.04e-74 c.66.1.22
1wznA/T0293-1wznA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0293-1wznA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8249e-152.96e-62
2as0A/T0293-2as0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0293-2as0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0110e-153.36e-65
1ve3A/T0293-1ve3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0293-1ve3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5346e-157.13e-64
1wxxA/T0293-1wxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxxA/T0293-1wxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6847e-143.25e-61
2gh1A/T0293-2gh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gh1A/T0293-2gh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2435e-144.16e-61
1l1eA/T0293-1l1eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l1eA/T0293-1l1eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0869e-132.67e-69 c.66.1.18
1ufkA/T0293-1ufkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufkA/T0293-1ufkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4965e-138.75e-60 c.66.1.39

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001