Best Alignments for T0293

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nv8A/T0293-1nv8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4831e-185.49e-83 c.66.1.30
1ve3A/T0293-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0293-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0026e-152.07e-71
1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dusA/T0293-1dusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0625e-153.06e-68 1dusA c.66.1.4
2as0A/T0293-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0293-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4896e-151.94e-63
1wznA/T0293-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0293-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9078e-146.43e-69
1ufkA/T0293-1ufkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufkA/T0293-1ufkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8771e-145.91e-67 c.66.1.39
1l3iA/T0293-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0293-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0476e-145.02e-69 c.66.1.22
1wxxA/T0293-1wxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxxA/T0293-1wxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1425e-131.38e-63
1vl5A/T0293-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0293-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3270e-136.38e-60 c.66.1.41
1xxlA/T0293-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0293-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4173e-133.73e-53

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001