Best Alignments for T0292

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1csn/T0292-1csn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1csn/ 5.5627e-271.32e-108 1csn d.144.1.7
1cmkE/T0292-1cmkE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cmkE/ 2.0180e-012.13e-142 1cdkA d.144.1.7
1cdkA/T0292-1cdkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cdkA/ 2.0180e-011.32e-143 1cdkA d.144.1.7
1blxA/T0292-1blxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1blxA/ 2.3949e-019.28e-140 1hcl d.144.1.7

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001