Best Alignments for T0291

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1p4oA/T0291-1p4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p4oA/T0291-1p4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5120e-405.81e-149 d.144.1.7
2evaA/T0291-2evaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2evaA/T0291-2evaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4549e-383.12e-144
2bikB/T0291-2bikB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bikB/T0291-2bikB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0202e-332.10e-126
1z57A/T0291-1z57A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z57A/T0291-1z57A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2970e-323.53e-114
1xjdA/T0291-1xjdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xjdA/T0291-1xjdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2388e-023.72e-152
1fmk/T0291-1fmk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmk/T0291-1fmk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5051e-028.35e-150 1fmk b.34.2.1
d.93.1.1
d.144.1.7
2bdwA/T0291-2bdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bdwA/T0291-2bdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9521e-023.69e-151
1yhvA/T0291-1yhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhvA/T0291-1yhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7623e-026.71e-148
1xh9A/T0291-1xh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xh9A/T0291-1xh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8436e-021.53e-144
2bfxA/T0291-2bfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bfxA/T0291-2bfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2136e-022.30e-157

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001