Best Alignments for T0290

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bitX/T0290-2bitX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bitX/T0290-2bitX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4479e-301.81e-98
1yndA/T0290-1yndA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yndA/T0290-1yndA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8667e-294.93e-97
1awqA/T0290-1awqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1awqA/T0290-1awqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8532e-292.14e-95 2cpl b.62.1.1
1xo7A/T0290-1xo7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo7A/T0290-1xo7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0717e-283.26e-96
1ihgA/T0290-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0290-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2241e-286.07e-98 2cpl a.118.8.1
b.62.1.1
1zcxA/T0290-1zcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zcxA/T0290-1zcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3288e-271.64e-96
2cfeA/T0290-2cfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfeA/T0290-2cfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3854e-271.53e-94
1vdnA/T0290-1vdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdnA/T0290-1vdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8391e-271.87e-92
1zkcA/T0290-1zkcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkcA/T0290-1zkcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7596e-268.99e-87
2a2nA/T0290-2a2nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2nA/T0290-2a2nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4378e-255.31e-87

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001