Best Alignments for T0290

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yndA/T0290-1yndA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yndA/T0290-1yndA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6182e-324.28e-98
1ihgA/T0290-1ihgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0290-1ihgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0870e-322.45e-97 2cpl a.118.8.1
b.62.1.1
1dywA/T0290-1dywA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dywA/T0290-1dywA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7651e-329.80e-98 2cpl b.62.1.1
2bitX/T0290-2bitX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bitX/T0290-2bitX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9182e-024.23e-98
1zcxA/T0290-1zcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zcxA/T0290-1zcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0531e-014.06e-97
1xo7A/T0290-1xo7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo7A/T0290-1xo7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0975e-011.77e-96
2cfeA/T0290-2cfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfeA/T0290-2cfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1519e-012.18e-94
1vdnA/T0290-1vdnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdnA/T0290-1vdnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2230e-012.89e-92
2alfA/T0290-2alfA-t06-global-adpstyle1.a2m 2alfA/T0290-2alfA-t06-global-adpstyle1.al 1.4896e-012.39e-73
2a2nA/T0290-2a2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2nA/T0290-2a2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7604e-016.98e-93

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001