Best Alignments for T0290

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1clh/T0290-1clh-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1clh/T0290-1clh-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1100e-293.33e-69 2cpl b.62.1.1
1ihgA/T0290-1ihgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0290-1ihgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0157e-294.89e-96 2cpl a.118.8.1
b.62.1.1
1xo7A/T0290-1xo7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo7A/T0290-1xo7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6239e-271.05e-94
1yndA/T0290-1yndA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yndA/T0290-1yndA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6888e-273.07e-95
2bitX/T0290-2bitX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bitX/T0290-2bitX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0932e-275.07e-94
1zcxA/T0290-1zcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zcxA/T0290-1zcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1807e-272.73e-93
2cfeA/T0290-2cfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfeA/T0290-2cfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4568e-272.92e-91
1vdnA/T0290-1vdnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdnA/T0290-1vdnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3689e-264.92e-89
2a2nA/T0290-2a2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2nA/T0290-2a2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8931e-253.13e-91
1zkcA/T0290-1zkcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkcA/T0290-1zkcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6460e-257.19e-89

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001