Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8056e-243.51e-66 1aye c.56.5.1
1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8363e-015.27e-74 b.3.2.1
c.56.5.1
1yw4A/T0289-1yw4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1703e-012.00e-76
2bcoA/T0289-2bcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8739e-013.57e-87
1yw6A/T0289-1yw6A-t06-local-adpstyle1.a2m 1yw6A/T0289-1yw6A-t06-local-adpstyle1.al 1.0805e+002.54e-45
2g9dA/T0289-2g9dA-t06-local-adpstyle1.a2m 2g9dA/T0289-2g9dA-t06-local-adpstyle1.al 1.0998e+003.96e-45
1d3cA/T0289-1d3cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d3cA/T0289-1d3cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4423e+004.52e-27 1cxlA b.1.18.2
b.3.1.1
b.71.1.1
c.1.8.1
2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4541e+002.60e-72
1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6924e+009.81e-70
2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7065e+001.75e-64

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001