Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7764e-228.91e-59
1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7550e-193.50e-54
1yw6A/T0289-1yw6A-t2k-global-adpstyle1.a2m 1yw6A/T0289-1yw6A-t2k-global-adpstyle1.al 7.8874e-093.02e-47
2g9dA/T0289-2g9dA-t2k-global-adpstyle1.a2m 2g9dA/T0289-2g9dA-t2k-global-adpstyle1.al 1.1290e-088.40e-49
1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6975e-057.66e-22 b.3.2.1
c.56.5.1
2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9404e-052.53e-25
2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1202e-041.76e-20
1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7504e-047.17e-23 1aye c.56.5.1
1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9407e-047.33e-25 c.56.5.1
d.58.3.1
1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9632e-028.26e-22

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001