Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4155e-233.24e-67
2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2185e-239.47e-68
1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6333e-221.02e-66 1aye c.56.5.1
1kwmA/T0289-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kwmA/T0289-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0433e-221.12e-63 c.56.5.1
d.58.3.1
1yw4A/T0289-1yw4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4101e-181.08e-60
1zliA/T0289-1zliA-t06-global-adpstyle1.a2m 1zliA/T0289-1zliA-t06-global-adpstyle1.al 1.3701e+007.84e-45
2boaA/T0289-2boaA-t06-local-adpstyle1.a2m 2boaA/T0289-2boaA-t06-local-adpstyle1.al 1.4883e+001.88e-41
1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5841e+003.92e-58 b.3.2.1
c.56.5.1
2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1830e+001.07e-59
1obr/T0289-1obr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1obr/T0289-1obr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2400e+008.63e-57 1aye c.56.5.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001