Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6213e-233.08e-70
1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1738e-206.66e-63
1yw6A/T0289-1yw6A-t2k-global-adpstyle1.a2m 1yw6A/T0289-1yw6A-t2k-global-adpstyle1.al 8.4963e-113.03e-54
2g9dA/T0289-2g9dA-t2k-global-adpstyle1.a2m 2g9dA/T0289-2g9dA-t2k-global-adpstyle1.al 2.7335e-104.64e-54
1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4894e-053.86e-24 b.3.2.1
c.56.5.1
2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1671e-047.56e-30
1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3707e-031.37e-26 1aye c.56.5.1
2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3876e-031.45e-18
1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5322e-035.50e-25 c.56.5.1
d.58.3.1
1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6635e-025.28e-22

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001