Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4494e-293.93e-80 1aye c.56.5.1
1pe1A/T0289-1pe1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pe1A/T0289-1pe1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5093e-022.70e-15 c.1.10.4
1jwqA/T0289-1jwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jwqA/T0289-1jwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0403e-021.20e-21 c.56.5.6
1rtqA/T0289-1rtqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rtqA/T0289-1rtqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0849e-014.36e-18 c.56.5.4
2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2134e-016.00e-84
1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2464e-011.94e-81
1kwmA/T0289-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kwmA/T0289-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3520e-012.93e-77 c.56.5.1
d.58.3.1
2boaA/T0289-2boaA-t06-local-adpstyle1.a2m 2boaA/T0289-2boaA-t06-local-adpstyle1.al 5.1660e-013.13e-42
1zliA/T0289-1zliA-t06-global-adpstyle1.a2m 1zliA/T0289-1zliA-t06-global-adpstyle1.al 6.2232e-014.95e-47
1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3557e-013.00e-66 b.3.2.1
c.56.5.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001