(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0289
    • gi|76664250|ref|XP_586387.2|_216:313 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2) [Bos taurus]
    • gi|55636525|ref|XP_508599.1|_192:289 PREDICTED: similar to aspartoacylase (aminocyclase) 3; HCV core-binding protein; aspartoacylase-3 [Pan troglodytes]
    • gi|68361632|ref|XP_685336.1|_218:314 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2), partial [Danio rerio]
                        10             20          30          40      
                        |              |           |           |      
   1 ...P..P...CAID.V.YKIMEKVDYPRN.....E.S.GDVAAVIHPNLQ..DQDWKPLHPGDPV
   2 kefP..P...CAIE.V.YKIIEKVDYPRD.....E.N.GEIAAVVHPNLQ..DQDWKPLHPGDPM
   3 kefP..P...CAIE.V.YKIIEKVDYPRD.....E.N.GEIAAIIHPNLQ..DQDWKPLHPGDPM
   4 kefP..P...CAIE.V.YKIIEKVDYPRD.....E.N.GEIAAVIHPNLQ..DQDWKPLHPGDPM
   5 kefP..P...CAIE.V.YKIIEKVDYPRD.....E.N.GEIAAIIHPNLQ..DQDWKPLHPGDPM
   6 kefP..P...CSID.V.YKIMEKVDYPRN.....E.S.GDMAAVIHPNLQ..DQDWKPLHPGDPV
   7 kefP..P...CSID.V.YKIMEKVDYPRN.....E.S.GDMAAVIHPNLQ..DQDWKPLHPGDPV
   8 kefP..P...CAIE.V.YKIIEKVDYPRD.....E.N.GEIAAVIHPNLQ..DQDWKPLHPGDPM
   9 kefP..P...CAIE.V.YKIMEKVDYPRN.....E.S.GEISAIIHPKLQ..DQDWKPLHPEDPV
  10 kefP..P...CAID.V.YKIMEKVDYPRN.....E.S.GDVAAVIHPNLQ..DQDWKPLHPGDPV
  11 kefP..P...CAIE.V.YKIMEKVDYPRN.....E.N.GDIAALIHPNLQ..DQDWKPLHPGDPV
  12 kefP..P...CSID.V.YKIMEKVDYPRN.....E.S.GDMAAVIHPNLQ..DQDWKPLHPGDPV
  13 kefP..P...CAID.V.YKIMEKVDYPRN.....E.S.GDVAAVIHPNLQlqDQDWKPLHPGDPV
  14 kefP..P...CAIE.V.YKIMRKVDYPRN.....E.S.GEISAIIHPKLQ..DQDWKPLHPEDPV
  15 kefP..P...CSID.V.YKIMEKVDYPRN.....E.S.GDMAAVIHPNLQ..DQDWKPLHPGDPV
  16 kefP..P...CAIE.V.YKIMEKVDYPRN.....E.N.GDIAALIHPNLQlsDQDWKPLHPGDPV
  17 ve.F..Pa..CTVE.V.FRVLERVDYPRD.....T.N.GNIIAMVHPNLQ..DCDWEPLTPGDPM
  18 ta.F..Pa..FEME.A.YRPVGVVDFPRT.....E.A.GNLAGTVHPQLQ..DRDFQPLQPGAPI
  19 ta.F..Pa..FEME.A.YRPVGVVDFPRT.....E.A.GHLAGTVHPQLQ..DRDFQPLQPGAPI
  20 vefP..P...CTVN.V.FRVQERMDYPRD.....T.N.GNITAMVHPHLQ..DCDWEPLNRGDPM
  21 md.L..Pa..FEMD.I.YRNLGSVDFPRT.....A.D.GDLAGTVHPQLQ..DHDFEPLRPGEPI
  22 md.L..Pa..FEMD.I.YRNLGSVDFPRT.....A.D.GDLAGTVHPQLQ..DHDFEPLRPGEPI
  23 ...I..Pki.NNLL.AlYKFTGTVDYPRN.....E.N.GDIQGMIHPDIQ..FRDYEPLNPGDPL
  24 ...I..Pki.NNLLsL.YKFTGTIDYPRN.....G.N.GDIQAMIHPDIQ..FRDYAPLNPGDPL
  25 me.F..Pa..FEME.V.YKNLGSVDFPRT.....T.D.GHLTGTVHSRLQ..DHDFEPLRPGEPI
  26 kefP..P...CTIE.V.YKITEKVDYPRN.....K.N.DEVIAIIHPNLQ..DQDWQPLNNGDPL
  27 kefL..P...CILE.V.FKVLDNVAYPRN.....A.N.GDCTAIIHNNLQ..DQDWNELKPGDPM
  28 ldhI..N...RDIV.I.YKHLKVVDYPKT.....K.D.GEIVAMIHPQLQ..GRDYQKLSPGEPM
  29 ...I..PhtsSQLT.F.YQYIETIDYPRSda6glQ.S.GEIQAMIHPQLQ..FKDYEPLNPGDPM
  30 te.F..Ps..FETD.V.HQVLYRADFPRN.....E.D.GEIEAVIHSELQ..DKDYLPLKPGDPI
  31 ktvY..P...EQLI.V.HRHLKNIDFPRD.....S.S.GVPSSLVHKDIQ..GRDWYPIKNGHPL
  32 iasT..N...ETLI.L.YDHLSVVDYPKQ.....Q.D.GKIFAMIHPELQ..DKDYQALNPGDPM
  33 t..IfeG...GCVD.V.FTMVKHIDYPRE.....R.DtGNIIAAVHPQLQ..DRDFCLLHPEDPL
  34 sptY..P...DEFV.V.HSHLGSLDLPRD.....A.L.GQPAACVHPSLQ..GRDWQPLQMGAPL
  35 qirL..P...KDLF.V.HVHQGSIDYPRD.....K.N.GNINALIHPERI..NQDWKPIKKDAPL
  36 sarY..P...DQVV.I.HLHLGSLDVPRR.....S.S.GDPDALVHPNLQ..GRDWQPLKAGDPL
  37 nlfF..P...NKLI.I.HRHIKSIDFPRD.....E.E.GNIDGYVHSLRQ..SKDWQELKKNDEL
  38 tvfE..G...GDVE.A.FKFIKSVDYPRDp....E.T.RNLTAAVHPQLQ..DRDFCLLKRGDPL
  39 rmlT..P...ERLV.V.HRHLGSLDLPRD.....P.Q.GRADALIHPELQ..GRDWSPIRRGDPL
  40 kakF..P...KNIL.V.HRHLKSIDFPRD.....E.S.GNQCGFIHSQIQ..GKDWIPINRETPL
  41 dlaL..P...RGLT.V.HRHLGSLDLPRH.....P.D.GRPAACLHPLRQ..HRDWQVIRPGDPL
  42 tvfE..G...GDVE.A.FKIIKSVDYPRD.....PvT.RSLNAAVHPQLQ..DRDFCLLKRGDPL
  43 ktvY..P...EQLI.V.HRHLKNIDFPRD.....S.S.GVPSSLVHGDNP..GRDWYPIKNGHPL
  44 kefP..P...CAIE.V.YKIMEKVDYPRN.....E.S.GEISAIIHPKLQ..DQDWKPLHPEDPV
  45 ...I..PeksHKLG.F.YEVFERLDYPR-.....I.N.EEIAAMIHPNLQ..FKDYKPLNPGDDL
  46 vvrL..P...RQVV.V.HRHLGSCDVPRG.....E.S.DQPQALVHQRLQ..GRDWVPFKPLDAI
  47 htfE..G...GQVE.A.YMMEDPVDYPRD.....P.TtGEITASVHSQLQ..DKDFKLLKPGDPI
  48 lieL..P...KDLV.V.HVHQGSVDYPRD.....E.K.GDIDGLIHPKRI..NRDWKMIKKGDPL
  49 tgrD..P...HNLV.V.HRHLGSVDLPRD.....Q.R.DCAAAMVHPQLQ..GQDWRPLMDGAAM
  50 vpeL..P...ASYD.A.YCYEETLKLPED.....E.Q.GERIGMVHQSVQ..DNDFEPLRSGDPI
  51 vpeL..P...ASYD.A.YCYEETLKLPVD.....E.Q.GERIGMVHQSVQ..DNDFEPLRSGDPI
  52 tpdL..P...MQMG.G.YRFTKKIRLPEN.....E.E.GDITAMIHPNLQ..NKDYEEIRPGDPL
  53 larL..P...DALV.V.HRHLGSRDLPKA.....E.N.GEPQALVHPELQ..GRDWQNIASTQAM
  54 n..V..Paa.DNCT.V.YQQIDTIDYPRD.....E.Q.GQIVAEIAPHI-..-RDYQAIKPGTPL
  55 ...L..PelsSSYE.A.FEYTETLKLPEN.....E.N.GERIGMVHKNVQ..DGDFKQLNSGDPI
  56 lpeL..P...SSYE.A.FEYKETLKLPEN.....E.N.GERIGMVHKNVQ..DGDFKQLNSGDPI
  57 vpeL..P...SERE.G.YRFLEKVQLPEN.....E.A.GELTAMLHPDLQ..DQDYQEIAPGDPF
  58 q..V..Gel.NDYD.A.YFYTEEVMIPVD.....H.D.GMRVATVHPMIC..GRDFGVVKPGEPL
  59 tdnL..P...-QCE.A.FRLGENVGFPLD.....E.N.GQRTAMIHHALQ..DSDFKPLMPGMPV
  60 qigL..L...SDYE.A.FFYTEEIRVPLD.....Q.E.GMRQALVHPTIC..GRDFEAVKPGAPL
  61 md.L..Pa..FEMD.I.YRNLGSVDFPRT.....A.D.GDLAGTVHPQLQ..DHDFEPLRPGEPI
  62 ...-..-...----.-.-------QAVRA.....E.V.GPSNPGLRLSSQ..AQDSQPLLPGMPI


        50                60           70        80               90   
        |                 |            |         |                |   
   1 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
   2 FLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
   3 FLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
   4 FLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
   5 FLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
   6 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LS....A.KS
   7 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LS....A.KS
   8 FLTLDGK.T...MPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LM.LN....A.KS
   9 FLTLDGK.T...ISLG..G..DQT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.NS
  10 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
  11 FLTLEGK.S...IPLG..G..DST...VYPVFVNEAAYYEKKEAFAKTTK..LI.LN....A.RS
  12 FVSLDGK.V...IPLG..G..DYT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LS....A.KS
  13 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.KS
  14 FLTLDGK.T...IPLG..G..DQT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LN....A.NS
  15 FVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFAKTTK..LT.LS....A.KS
  16 FLTLEGK.S...IPLG..G..DST...VYPVFVNEAAYYEKKEAFAKTTK..LI.LN....A.RS
  17 FQTFDGK.T...IYYQ..G..PGT...VYPTFINEAAYYEKQQAFVTTRR..EA.LV....A.ST
  18 FQMFSGE.D...LLYE..G..EST...VYPVFINEAAYYEKGVAFVQTEK..FT.FT....V.PA
  19 FQMFSGE.D...LLYE..G..EST...VYPVFINEAAYYEKGVAFVQTEK..FT.FT....V.PA
  20 FLTFDGR.T...ILYE..G..ANT...VYPTFINEAAYYEKQQAFVTTCR..EI.LA....A.NA
  21 FKLFSGE.D...VLYE..G..DSI...VYPVFINEAAYYEKHVAFLKSEK..IR.VT....V.PA
  22 FKLFSGE.D...VLYE..G..DSI...VYPVFINEAAYYEKHVAFLKSEK..IR.VT....V.PA
  23 FLTLDGK.A...IAYE..G..TST...VYPIFINEAAYYEKGIAMLFTEK..QL.IN....P.SS
  24 FLTLDGK.A...IAYE..G..TSI...VYPIFINEAAYYEKGIAMLFTEK..QL.IN....F.D-
  25 FKLFSGE.D...VLYE..G..DSV...VYPLFVNEAAYYEKRVAFLKSEK..IR.IS....V.PA
  26 FLTLDGE.V...IAYK..G..DCT...AYPTFINEAAYYEKKQAFVKTIK..ME.LT....A.GH
  27 FLTLDGR.M...IAYE..G..DCI...VYPTFINEAAYYEKNQAFTTTQK..MT.LC....A.QS
  28 FLTFDNQ.T...IYYQ..E..ESP...VWPVFINEAAYYEKGIAMCLTKK..ES.IR....V.--
  29 FLTFAGK.D...IFYE..G..EST...VYPIFINEAAYYEKGIAMYLSQK..LQeI-....-.--
  30 FQRLNGE.D...ILYN..G..EKQ...IYPVFINEAAYYEKKVAFIATEK..TH.CL....V.PA
  31 FESLSGDlT...LLLE..GglEEE...FVPVFINEAAYAEKNIAMSLTKK..EM.WD....VqKD
  32 FITFDNK.T...IVYE..G..AST...VWPIFINEAAYYEKGIAMCLTQK..QQ.IN....I.--
  33 FQTFSGE.T...LKYK..G..KEP...LYPFFINECAYYEKSIALSLARK..RC.VV....V.PS
  34 FLWPDGE.V...FRFE..G..RDS...PIPVFINEAAYVEKHIAMSLTCR..EV.CP....L.PE
  35 FMDMEGK.T...KTYA..D..EDT...IWPVFIGEVAYKEKNIAMSFTKK..EV.VS....VsDQ
  36 FIDAESN.T...VVFD..G..EDG...LVPVFINEAAYAEKAIALSLTKR..ET.WP....LpKD
  37 FCKLNGE.I...IRFE..E..DEP...YIPVFINEAAYVEKNIAMSFTKR..EL.WN....FkKE
  38 FLSFSGE.T...VTCE..E..EEP...LHPFFINEGAYYEKGIAFHLAKK..WI.LT....V.PS
  39 FLTAAGD.T...ISYS..G..PDG...VVPVFINEAAYAEKAIALSVTSK..EE.WPlspeA.PG
  40 FEDTEGN.T...VKLS..A..ENFqedLIPVFINEAAYLEKGIAMSLTVR..ES.WR....FeRN
  41 FVTAGGE.T...LRYEptD..PEP...LWPVFINEAAYGEKGIALSLTRR..ER.WP....C.EA
  42 FLSFSGE.T...VKYE..E..EEP...LHPLFINECAYYEKGIAFHLAKR..MR.LT....I.PA
  43 FESLSGDlT...LLLE..GglEEE...FVPVFINEAAYAEKNIAMSLTKK..EM.WD....VqKD
  44 FLTLDGK.T...ISLG..G..DQT...VYPVFVNEAAYYEK---------..--.--....-.--
  45 FITFDGK.T...ITYQ..G..DST...VYPVFVNEAAYYEKGIAMCLAKQreIV.VN....F.NN
  46 FEAADGS.T...VETP..Qm.EHQ...SIPVFINEAAYAEKHIAFSLTRR..EV.WT....MePQ
  47 FKKFSGE.T...VTYE..G..EE-...LYSFFINECAYYEKKIAFLLGEK..VR.LD....-.--
  48 FLNSQGI.I...YKYD..G..DQF...IWPVFIGEVAYKEKQIAMSYTNK..EV.IC....SkNE
  49 FELPRGG.T...VPLQa.D..EGE...TWPLFINEAAYAEKRIAFSLTRR..EV.WP....IdPS
  50 FTLFDGT.E...IFWE..G..DYE...AYPHFINEAAYYDNNLAMSLGKK..IV.VS....T.N-
  51 FTLFDGT.E...IFWE..G..DYE...AYPHFINEAAYYDNNLAMSLGKK..IV.VS....T.N-
  52 FITLGGE.T...IPYQ..G..DKA...VYGAFINEAAYYDQHIGLSFMEK..IN.IE....L.KQ
  53 FRAADGT.DrceAWVG..G..E--...-IPVFVNEAAYAEKSIAFSLTRR..EV.WP....VePN
  54 FYHRRGN.V...TPYQ..G..AAT...VYPVFIGEAAYVEKGIAMALTQR..KT.IA....I.--
  55 FTLFDGS.E...ICWE..G..DYE...AYPHFINEAAYYDNNLAMSLAKK..RI.VE....I.--
  56 FTLFDGS.E...ISWE..G..DYE...AYPHFINEAAYYDNNLAMSLAKK..RI.VE....V.--
  57 FMTLSGE.T...IPYP..G..TTP...VYGAFINEAAYYDAHVGLSLMEK..IT.IP....Y.RR
  58 LATFFGY.D...IFWE..G..KQE...IYPHFINESAYSKANIAMALAEK..KC.VR....A.SD
  59 FRTFDGK.D...ITWN..S..DKE...TYPHFINEAAYFKLDVAFATAQR..II.L-....-.--
  60 LATFAGY.D...IHWN..G..KGE...IYPHFINESAYSTANIAMALAKK..RR.VSs...V.--
  61 FKLFSGE.D...VLYE..G..DSI...VYPVFINEASQ------------..--.--....-.--
  62 SQMFSDE.D...VLSE..G..EST...VYPVFINEAAYYENGMAVIQIEK..LP.LC....AcPA


                  
                 
   1 .IRST.LH....
   2 .IRCS.LH....
   3 .IRCC.LH....
   4 .IRCS.LH....
   5 .IRCC.LHd...
   6 .IRST.LH....
   7 .IRST.LH....
   8 .IRCS.VH....
   9 .IRSS.LH....
  10 .IRST.LH....
  11 .IRSS.LH....
  12 .IRST.LH....
  13 .IRST.LH....
  14 .IRSS.LH....
  15 .IRST.LP....
  16 .IRSS.LH....
  17 .IR--.--....
  18 .M-PA.LTpaps
  19 .M-PA.LTpaps
  20 .IRKA.F-....
  21 .LLR-.LTprst
  22 .LLR-.LTprst
  23 .----.--....
  24 .----.--....
  25 .LPG-.LTpsst
  26 .IRSS.AVgqn.
  27 .IRCTePK....
  28 .----.--....
  29 .----.--....
  30 .LKVQ.--....
  31 .WIND.LSkll.
  32 .----.--....
  33 .I---.--....
  34 qWQGA.LQqlv.
  35 .MYEE.FFs...
  36 .WKEA.LAell.
  37 .WKQA.LIdli.
  38 .VQVH.TKnsa.
  39 .ALQD.LL....
  40 .WYED.LKkiv.
  41 aWAED.LQqla.
  42 .VQVQ.KD....
  43 .WIND.LSkll.
  44 .----.--....
  45 .----.--....
  46 .WLDH.LSell.
  47 .----.--....
  48 .WVQE.FHrl..
  49 .WGQA.LEqlm.
  50 .----.--....
  51 .----.--....
  52 .EG--.--....
  53 .WLLA.LKqll.
  54 .----.--....
  55 .----.--....
  56 .----.--....
  57 .----.--....
  58 .----.--....
  59 .----.--....
  60 .----.--....
  61 .----.--....
  62 .ETRC.LApve.