Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5577e+008.86e-05
1mjc/T0289-1mjc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mjc/T0289-1mjc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3251e+001.78e-02 1mjc b.40.4.5
1o6aA/T0289-1o6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o6aA/T0289-1o6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0584e+011.94e-02 b.139.1.1
1rflA/T0289-1rflA-t04-global-adpstyle1.a2m 1rflA/T0289-1rflA-t04-global-adpstyle1.al 1.4459e+011.41e+00 c.37.1.8
1cv8/T0289-1cv8-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cv8/T0289-1cv8-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4585e+018.95e-06 1cv8 d.3.1.1
1hpi/T0289-1hpi-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hpi/T0289-1hpi-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4970e+011.78e-01 1ckuA g.35.1.1
1n7oA/T0289-1n7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n7oA/T0289-1n7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7183e+013.91e-05 a.102.3.2
b.24.1.1
b.30.5.2
1wruA/T0289-1wruA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wruA/T0289-1wruA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9744e+016.29e-03
1mwmA/T0289-1mwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mwmA/T0289-1mwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0879e+014.99e-01 c.55.1.1
c.55.1.1
1tux/T0289-1tux-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tux/T0289-1tux-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1000e+013.11e+03 1taxA c.1.8.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001