Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6197e-014.63e-06
1mjc/T0289-1mjc-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mjc/T0289-1mjc-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3497e+005.92e-03 1mjc b.40.4.5
1vjvA/T0289-1vjvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjvA/T0289-1vjvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9227e+009.68e-06 d.3.1.9
1aw7A/T0289-1aw7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aw7A/T0289-1aw7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4746e+011.62e-05 1aw7A b.40.2.2
d.15.6.1
1cv8/T0289-1cv8-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cv8/T0289-1cv8-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4918e+012.16e-06 1cv8 d.3.1.1
1rcqA/T0289-1rcqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rcqA/T0289-1rcqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9876e+014.98e-06 b.49.2.2
c.1.6.1
1q6uA/T0289-1q6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q6uA/T0289-1q6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0870e+012.98e-04 d.26.1.1
1n7oA/T0289-1n7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n7oA/T0289-1n7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1520e+012.36e-04 a.102.3.2
b.24.1.1
b.30.5.2
1wruA/T0289-1wruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wruA/T0289-1wruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1795e+011.95e-03
2bwqA/T0289-2bwqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bwqA/T0289-2bwqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3254e+011.76e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001