(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0289
    • gi|76664250|ref|XP_586387.2|_203:312 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2) [Bos taurus]
    • gi|55636525|ref|XP_508599.1|_178:283 PREDICTED: similar to aspartoacylase (aminocyclase) 3; HCV core-binding protein; aspartoacylase-3 [Pan troglodytes]
    • gi|68361632|ref|XP_685336.1|_205:309 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2), partial [Danio rerio]
              10           20        30             40          50     
              |            |         |              |           |     
   1 ALDFIQRFNEGKEF..PPCA.IDVYKIMEKVDYPRNE.....SGDVAAVIHPNLQ..DQDWKPLH
   2 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAVIHPNLQ..DQDWKPLH
   3 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAVVHPNLQ..DQDWKPLH
   4 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAIIHPNLQ..DQDWKPLH
   5 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAIIHPNLQ..DQDWKPLH
   6 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAVIHPNLQ..DQDWKPLH
   7 -LDFIQHFNEGKEF..PPCS.IDVYKIMEKVDYPRNE.....SGDMAAVIHPNLQ..DQDWKPLH
   8 -LDFIHNFNEGKEF..PPCA.IEVYKIMEKVDYPRNE.....NGDIAALIHPNLQ..DQDWKPLH
   9 -LDFIQHFNEGKEF..PPCS.IDVYKIMEKVDYPRNE.....SGDMAAVIHPNLQ..DQDWKPLH
  10 -LDFIQHFNEGKEF..PPCS.IDVYKIMEKVDYPRNE.....SGDMAAVIHPNLQ..DQDWKPLH
  11 -LDFIQRFNEGKEF..PPCA.IDVYKIMEKVDYPRNE.....SGDVAAVIHPNLQ..DQDWKPLH
  12 -LDFIQHFNEGKEF..PPCS.IDVYKIMEKVDYPRNE.....SGDMAAVIHPNLQ..DQDWKPLH
  13 -LDFIHNFNEGKEF..PPCA.IEVYKIMRKVDYPRNE.....SGEISAIIHPKLQ..DQDWKPLH
  14 -LDFIHNFNEGKEF..PPCA.IEVYKIMEKVDYPRNE.....SGEISAIIHPKLQ..DQDWKPLH
  15 -LDFIHNFNEGKEF..PPCA.IEVYKIMEKVDYPRNE.....NGDIAALIHPNLQlsDQDWKPLH
  16 -LDFIQRFNEGKEF..PPCA.IDVYKIMEKVDYPRNE.....SGDVAAVIHPNLQlqDQDWKPLH
  17 -LDFVHLFNEGKEF..PPCT.IEVYKITEKVDYPRNK.....NDEVIAIIHPNLQ..DQDWQPLN
  18 VLDFIELFNQGTAF..PAFE.MEAYRPVGVVDFPRTE.....AGNLAGTVHPQLQ..DRDFQPLQ
  19 VLDFIELFNQGTAF..PAFE.MEAYRPVGVVDFPRTE.....AGHLAGTVHPQLQ..DRDFQPLQ
  20 -LDFIELFNNGVEF..PPCT.VNVFRVQERMDYPRDT.....NGNITAMVHPHLQ..DCDWEPLN
  21 -LDFINYFNDGKEF..LPCI.LEVFKVLDNVAYPRNA.....NGDCTAIIHNNLQ..DQDWNELK
  22 -LDFIELFNEGVEF..PACT.VEVFRVLERVDYPRDT.....NGNIIAMVHPNLQ..DCDWEPLT
  23 ILDFIELFNQGMDL..PAFE.MDIYRNLGSVDFPRTA.....DGDLAGTVHPQLQ..DHDFEPLR
  24 ILDFIELFNQGMDL..PAFE.MDIYRNLGSVDFPRTA.....DGDLAGTVHPQLQ..DHDFEPLR
  25 ILDFIELFNQGMEF..PAFE.MEVYKNLGSVDFPRTT.....DGHLTGTVHSRLQ..DHDFEPLR
  26 ILDYLEQYNRGNIP..KINNlLALYKFTGTVDYPRNE.....NGDIQGMIHPDIQ..FRDYEPLN
  27 ILDYVEKYNQGNIPk.INNL.LSLYKFTGTIDYPRNG.....NGDIQAMIHPDIQ..FRDYAPLN
  28 -LDFLDLFNQGTEF..PSFE.TDVHQVLYRADFPRNE.....DGEIEAVIHSELQ..DKDYLPLK
  29 -LDFIHNFNEGKEF..PPCA.IEVYKIMEKVDYPRNE.....SGEISAIIHPKLQ..DQDWKPLH
  30 VLDYLEQFNQGKIAs.TNET.LILYDHLSVVDYPKQQ.....DGKIFAMIHPELQ..DKDYQALN
  31 -LDFIEHFNEGKLDh.INRD.IVIYKHLKVVDYPKTK.....DGEIVAMIHPQLQ..GRDYQKLS
  32 CLEALSSVASGSPT..YPDE.FVVHSHLGSLDLPRDA.....LGQPAACVHPSLQ..GRDWQPLQ
  33 VLDWVRSFNSGTIF..EGGC.VDVFTMVKHIDYPRERd....TGNIIAAVHPQLQ..DRDFCLLH
  34 -IDWIHKFNSGTVF..EGGD.VEAFKIIKSVDYPRDPv....TRSLNAAVHPQLQ..DRDFCLLK
  35 --DEINKLKNNQIR..LPKD.LFVHVHQGSIDYPRDK.....NGNINALIHPERI..NQDWKPIK
  36 -LHLIAAAWNGRML..TPER.LVVHRHLGSLDLPRDP.....QGRADALIHPELQ..GRDWSPIR
  37 -IDWIHKFNSGTVF..EGGD.VEAFKFIKSVDYPRDPe....TRNLTAAVHPQLQ..DRDFCLLK
  38 ILDFVHLNNTNEVPe.LPAS.YDAYCYEETLKLPEDE.....QGERIGMVHQSVQ..DNDFEPLR
  39 ILDFVHLNNTNEVPe.LPAS.YDAYCYEETLKLPVDE.....QGERIGMVHQSVQ..DNDFEPLR
  40 -LAAITSVRDGSAR..YPDQ.VVIHLHLGSLDVPRRS.....SGDPDALVHPNLQ..GRDWQPLK
  41 CLKEISNVINSKTV..YPEQ.LIVHRHLKNIDFPRDS.....SGVPSSLVHKDIQ..GRDWYPIK
  42 ILDYFEGCNQGNIPh.TSSQ.LTFYQYIETIDYPRSDay6lqSGEIQAMIHPQLQ..FKDYEPLN
  43 ILDYVDLHNTNALPe.LPSS.YEAFEYKETLKLPENE.....NGERIGMVHKNVQ..DGDFKQLN
  44 -MEQIHEVKNLNLF..FPNK.LIIHRHIKSIDFPRDE.....EGNIDGYVHSLRQ..SKDWQELK
  45 ILDYVDLHNTNALPe.LSSS.YEAFEYTETLKLPENE.....NGERIGMVHKNVQ..DGDFKQLN
  46 -LDYLELKNTGQTPd.LPMQ.MGGYRFTKKIRLPENE.....EGDITAMIHPNLQ..NKDYEEIR
  47 CLDFLELWNQKAVPe.LPSE.REGYRFLEKVQLPENE.....AGELTAMLHPDLQ..DQDYQEIA
  48 CLKEISNVINSKTV..YPEQ.LIVHRHLKNIDFPRDS.....SGVPSSLVHGDNP..GRDWYPIK
  49 -LAVLASARRGDLA..LPRG.LTVHRHLGSLDLPRHP.....DGRPAACLHPLRQ..HRDWQVIR
  50 VLDYLEQHNLGQVG..ELND.YDAYFYTEEVMIPVDH.....DGMRVATVHPMIC..GRDFGVVK
  51 CFEALASVRSGVVR..LPRQ.VVVHRHLGSCDVPRGE.....SDQPQALVHQRLQ..GRDWVPFK
  52 CLRALYQVRQELAR..LPDA.LVVHRHLGSRDLPKAE.....NGEPQALVHPELQ..GRDWQNIA
  53 -IDEIALAKSGKAK..FPKN.ILVHRHLKSIDFPRDE.....SGNQCGFIHSQIQ..GKDWIPIN
  54 VLDYVEKHNLNQIG..LLSD.YEAFFYTEEIRVPLDQ.....EGMRQALVHPTIC..GRDFEAVK
  55 -LDYLDKKNQDQIPe.KSHK.LGFYEVFERLDYPR-I.....NEEIAAMIHPNLQ..FKDYKPLN
  56 --DEIDKLKKNLIE..LPKD.LVVHVHQGSVDYPRDE.....KGDIDGLIHPKRI..NRDWKMIK
  57 ILAYLQASTSGNVP..AADN.CTVYQQIDTIDYPRDE.....QGQIVAEIAPHI-..-RDYQAIK
  58 -FEFVQEFNAGHTF..EGGQ.VEAYMMEDPVDYPRDPt....TGEITASVHSQLQ..DKDFKLLK
  59 -CQELAAARAGTGR..DPHN.LVVHRHLGSVDLPRDQ.....RDCAAAMVHPQLQ..GQDWRPLM
  60 ILDFCMAYNNGSIStdNLPQ.CEAFRLGENVGFPLDE.....NGQRTAMIHHALQ..DSDFKPLM
  61 --------------..---E.MDIYRNLGSVDFPRTA.....DGDLAGTVHPQLQ..DHDFEPLR
  62 -LDFIELFNQAV--..----.-------------RAE.....VGPSNPGLRLSSQ..AQDSQPLL
  63 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAIIHPNLQ..--------
  64 -LDFIHHFNEGKEF..PPCA.IEVYKIIEKVDYPRDE.....NGEIAAIIHPNLQ..TGN-----
  65 VLDFIELFNQGTAF..PAFE.MEAYRPVGVVDFPRTE.....AGHLAGTVHPQAC..--------
  66 --------NQGMDL..PAFE.MDIYRNLGSVDFPRTA.....DGDLAGTVHPQL-..--------


         60        70                80        90       100       110  
         |         |                 |         |         |         |  
   1 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRSTLH
   2 PGDPMFLTLDGKTIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRCSL-
   3 PGDPMFLTLDGKTIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRCSL-
   4 PGDPMFLTLDGKTIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRCCL-
   5 PGDPMFLTLDGKTIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRCCL-
   6 PGDPMFLTLDGKTMPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLMLNAKSIRCSV-
   7 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLSAKSIRSTL-
   8 PGDPVFLTLEGKSIPL...G..GDS...TVYPVFVNEAAYYEKKEAFAKTTKLILNARSIRSSL-
   9 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLSAKSIRSTL-
  10 PGDPVFVSLDGKVIPL...G..GDY...TVYPVFVNEAAYYEKKEAFAKTTKLTLSAKSIRSTL-
  11 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRSTL-
  12 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLSAKSIRST--
  13 PEDPVFLTLDGKTIPL...G..GDQ...TVYPVFVNEAAYYEKKEAFAKTTKLTLNANSIRSSL-
  14 PEDPVFLTLDGKTISL...G..GDQ...TVYPVFVNEAAYYEKKEAFAKTTKLTLNANSIRSSL-
  15 PGDPVFLTLEGKSIPL...G..GDS...TVYPVFVNEAAYYEKKEAFAKTTKLILNARSIRSSL-
  16 PGDPVFVSLDGKVIPL...G..GDC...TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRSTL-
  17 NGDPLFLTLDGEVIAY...K..GDC...TAYPTFINEAAYYEKKQAFVKTIKMELTAGHIR----
  18 PGAPIFQMFSGEDLLY...E..GES...TVYPVFINEAAYYEKGVAFVQTEKFTFTVPA------
  19 PGAPIFQMFSGEDLLY...E..GES...TVYPVFINEAAYYEKGVAFVQTEKFTFTVPA------
  20 RGDPMFLTFDGRTILY...E..GAN...TVYPTFINEAAYYEKQQAFVTTCREILAANA------
  21 PGDPMFLTLDGRMIAY...E..GDC...IVYPTFINEAAYYEKNQAFTTTQKMTLCAQSIRCT--
  22 PGDPMFQTFDGKTIYY...Q..GPG...TVYPTFINEAAYYEKQQAFVTTRREALV---------
  23 PGEPIFKLFSGEDVLY...E..GDS...IVYPVFINEAAYYEKHVAFLKSEKIRVTVP-------
  24 PGEPIFKLFSGEDVLY...E..GDS...IVYPVFINEAAYYEKHVAFLKSEKIRVTVP-------
  25 PGEPIFKLFSGEDVLY...E..GDS...VVYPLFVNEAAYYEKRVAFLKSEKIRISVPA------
  26 PGDPLFLTLDGKAIAY...E..GTS...TVYPIFINEAAYYEKGIAMLFTEKQLI----------
  27 PGDPLFLTLDGKAIAY...E..GTS...IVYPIFINEAAYYEKGIAMLFTEKQLI----------
  28 PGDPIFQRLNGEDILY...N..GEK...QIYPVFINEAAYYEKKVAFIATEKTHCLVP-------
  29 PEDPVFLTLDGKTISL...G..GDQ...TVYPVFVNEAAYYE-----------------------
  30 PGDPMFITFDNKTIVY...E..GAS...TVWPIFINEAAYYEKGIAMCLTQKQ------------
  31 PGEPMFLTFDNQTIYY...Q..EES...PVWPVFINEAAYYEKGIAMCLTKKE------------
  32 MGAPLFLWPDGEVFRF...E..GRD...SPIPVFINEAAYVEKHIAMSLTCREVCPL--------
  33 PEDPLFQTFSGETLKY...K..GKE...PLYPFFINECAYYEKSIALSLARKRCVVV--------
  34 RGDPLFLSFSGETVKY...E..EEE...PLHPLFINECAYYEKGIAFHLAKRMRLTIPAVQ----
  35 KDAPLFMDMEGKTKTY...A..DED...TIWPVFIGEVAYKEKNIAMSFTKKEVVSVS-------
  36 RGDPLFLTAAGDTISY...S..GPD...GVVPVFINEAAYAEKAIALSVTSKEEWPLS-------
  37 RGDPLFLSFSGETVTC...E..EEE...PLHPFFINEGAYYEKGIAFHLAKKWILTVPSVQ----
  38 SGDPIFTLFDGTEIFW...E..GDY...EAYPHFINEAAYYDNNLAMSLGKKIVV----------
  39 SGDPIFTLFDGTEIFW...E..GDY...EAYPHFINEAAYYDNNLAMSLGKKIVV----------
  40 AGDPLFIDAESNTVVF...D..GED...GLVPVFINEAAYAEKAIALSLTKRETWPL--------
  41 NGHPLFESLSGDLTLLlegG..LEE...EFVPVFINEAAYAEKNIAMSLTKKEMWDVQ-------
  42 PGDPMFLTFAGKDIFY...E..GES...TVYPIFINEAAYYEKGIAMYLSQK-------------
  43 SGDPIFTLFDGSEISW...E..GDY...EAYPHFINEAAYYDNNLAMSLAKKRI-----------
  44 KNDELFCKLNGEIIRF...E..EDE...PYIPVFINEAAYVEKNIAMSFTKRELWNFK-------
  45 SGDPIFTLFDGSEICW...E..GDY...EAYPHFINEAAYYDNNLAMSLAKKRI-----------
  46 PGDPLFITLGGETIPY...Q..GDK...AVYGAFINEAAYYDQHIGLSFMEKINI----------
  47 PGDPFFMTLSGETIPY...P..GTT...PVYGAFINEAAYYDAHVGLSLMEKITI----------
  48 NGHPLFESLSGDLTLLlegG..LEE...EFVPVFINEAAYAEKNIAMSLTKKEMWDVQ-------
  49 PGDPLFVTAGGETLRY...EptDPE...PLWPVFINEAAYGEKGIALSLTRRERWPC--------
  50 PGEPLLATFFGYDIFW...E..GKQ...EIYPHFINESAYSKANIAMALAEKKCV----------
  51 PLDAIFEAADGSTVETp..Q..MEH...QSIPVFINEAAYAEKHIAFSLTRREVWTME-------
  52 STQAMFRAADGTDRCE...A..WVG...GEIPVFVNEAAYAEKSIAFSLTRREVWPVE-------
  53 RETPLFEDTEGNTVKL...S..AENfqeDLIPVFINEAAYLEKGIAMSLTVRESWRF--------
  54 PGAPLLATFAGYDIHW...N..GKG...EIYPHFINESAYSTANIAMALAKKR------------
  55 PGDDLFITFDGKTITY...Q..GDS...TVYPVFVNEAAYYEKGIAMCLAKQREI----------
  56 KGDPLFLNSQGIIYKY...D..GDQ...FIWPVFIGEVAYKEKQIAMSYTNKEVICS--------
  57 PGTPLFYHRRGNVTPY...Q..GAA...TVYPVFIGEAAYVEKGIAMALTQRK------------
  58 PGDPIFKKFSGETVTY...E..GE-...ELYSFFINECAYYEKKIAFLLGEKV------------
  59 DGAAMFELPRGGTVPL...Qa.DEG...ETWPLFINEAAYAEKRIAFSLTRREVWPID-------
  60 PGMPVFRTFDGKDITW...N..SDK...ETYPHFINEAAYFKLDVAFATAQRI------------
  61 PGEPIFKLFSGEDVLY...E..GDS...IVYPVFINEA---------------------------
  62 PGMPISQMFSDEDVLS...E..GES...TVYPVFINEAAYYENGMAVIQIEKLPLCACP------
  63 ----------------...-..---...-------------------------------------
  64 ----------------...-..---...-------------------------------------
  65 ----------------...-..---...-------------------------------------
  66 ----------------...-..---...-------------------------------------