(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0289
    • gi|76664250|ref|XP_586387.2|_202:313 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2) [Bos taurus]
    • gi|68361632|ref|XP_685336.1|_204:314 PREDICTED: similar to Aspartoacylase (Aminoacylase-2) (ACY-2), partial [Danio rerio]
    • gi|55636525|ref|XP_508599.1|_178:289 PREDICTED: similar to aspartoacylase (aminocyclase) 3; HCV core-binding protein; aspartoacylase-3 [Pan troglodytes]
                        10             20        30               40   
                        |              |         |                |   
   1 ...A...LD....FIQRFNEGKE.F.P.PC..AIDVYKIMEKVDYPRN.....E.S.GDVAAVIH
   2 ikhA...LD....FIHHFNEGKE.F.P.PC..AIEVYKIIEKVDYPRD.....E.N.GEIAAVVH
   3 ikhA...LD....FIHHFNEGKE.F.P.PC..AIEVYKIIEKVDYPRD.....E.N.GEIAAVIH
   4 ikhA...LD....FIHHFNEGKE.F.P.PC..AIEVYKIIEKVDYPRD.....E.N.GEIAAIIH
   5 ikhA...LD....FIHHFNEGKE.F.P.PC..AIEVYKIIEKVDYPRD.....E.N.GEIAAIIH
   6 ikhA...LD....FIHHFNEGKE.F.P.PC..AIEVYKIIEKVDYPRD.....E.N.GEIAAVIH
   7 ikhA...LD....FIQHFNEGKE.F.P.PC..SIDVYKIMEKVDYPRN.....E.S.GDMAAVIH
   8 ikhA...LD....FIQHFNEGKE.F.P.PC..SIDVYKIMEKVDYPRN.....E.S.GDMAAVIH
   9 ikhA...LD....FIQHFNEGKE.F.P.PC..SIDVYKIMEKVDYPRN.....E.S.GDMAAVIH
  10 ikhA...LD....FIQHFNEGKE.F.P.PC..SIDVYKIMEKVDYPRN.....E.S.GDMAAVIH
  11 ikyA...LD....FIHNFNEGKE.F.P.PC..AIEVYKIMEKVDYPRN.....E.N.GDIAALIH
  12 lkhA...LD....FIQRFNEGKE.F.P.PC..AIDVYKIMEKVDYPRN.....E.S.GDVAAVIH
  13 iqhA...LD....FIHNFNEGKE.F.P.PC..AIEVYKIMEKVDYPRN.....E.S.GEISAIIH
  14 iqhA...LD....FIHNFNEGKE.F.P.PC..AIEVYKIMRKVDYPRN.....E.S.GEISAIIH
  15 lkhA...LD....FIQRFNEGKE.F.P.PC..AIDVYKIMEKVDYPRN.....E.S.GDVAAVIH
  16 ikyA...LD....FIHNFNEGKE.F.P.PC..AIEVYKIMEKVDYPRN.....E.N.GDIAALIH
  17 lkhA...LD....FIELFNNGVE.F.P.PC..TVNVFRVQERMDYPRD.....T.N.GNITAMVH
  18 lkhA...LD....FIELFNEGVE.F.P.AC..TVEVFRVLERVDYPRD.....T.N.GNIIAMVH
  19 ikhA...LD....FINYFNDGKE.F.L.PC..ILEVFKVLDNVAYPRN.....A.N.GDCTAIIH
  20 vatV...LD....FIELFNQGTA.F.P.AF..EMEAYRPVGVVDFPRT.....E.A.GNLAGTVH
  21 vasI...LD....FIELFNQGMD.L.P.AF..EMDIYRNLGSVDFPRT.....A.D.GDLAGTVH
  22 vasI...LD....FIELFNQGMD.L.P.AF..EMDIYRNLGSVDFPRT.....A.D.GDLAGTVH
  23 vatV...LD....FIELFNQGTA.F.P.AF..EMEAYRPVGVVDFPRT.....E.A.GHLAGTVH
  24 kh.G...LD....FVHLFNEGKE.F.P.PC..TIEVYKITEKVDYPRN.....K.N.DEVIAIIH
  25 iytI...LD....YLEQYNRGNI.PkI.NN..LLALYKFTGTVDYPRN.....E.N.GDIQGMIH
  26 vasI...LD....FIELFNQGME.F.P.AF..EMEVYKNLGSVDFPRT.....T.D.GHLTGTVH
  27 iytI...LD....YVEKYNQGNI.PkI.NN..LLSLYKFTGTIDYPRN.....G.N.GDIQAMIH
  28 q..Is..LD....FIEHFNEGKLdH.I.NR..DIVIYKHLKVVDYPKT.....K.D.GEIVAMIH
  29 iqhA...LD....FIHNFNEGKE.F.P.PC..AIEVYKIMEKVDYPRN.....E.S.GEISAIIH
  30 ...VdltID....WIHKFNSGTV.F.E.GG..DVEAFKFIKSVDYPRDp....E.T.RNLTAAVH
  31 ...VdltID....WIHKFNSGTV.F.E.GG..DVEAFKIIKSVDYPRD.....PvT.RSLNAAVH
  32 vyaV...LD....YLEQFNQGKI.AsT.NE..TLILYDHLSVVDYPKQ.....Q.D.GKIFAMIH
  33 lvnCs..LD....FLDLFNQGTE.F.P.SF..ETDVHQVLYRADFPRN.....E.D.GEIEAVIH
  34 vqhV...LD....WVRSFNSGTI.F.E.GG..CVDVFTMVKHIDYPRE.....R.DtGNIIAAVH
  35 issL...RD....EINKLKNNQI.R.L.PK..DLFVHVHQGSIDYPRD.....K.N.GNINALIH
  36 iyaI...LD....YFEGCNQGNI.PhT.SS..QLTFYQYIETIDYPRSda6glQ.S.GEIQAMIH
  37 ldsC...LK....EISNVINSKT.V.Y.PE..QLIVHRHLKNIDFPRD.....S.S.GVPSSLVH
  38 leaV...LA....AITSVRDGSA.R.Y.PD..QVVIHLHLGSLDVPRR.....S.S.GDPDALVH
  39 tkhI...LD....FVHLNNTNEV.PeL.PA..SYDAYCYEETLKLPED.....E.Q.GERIGMVH
  40 leaA...LA....VLASARRGDL.A.L.PR..GLTVHRHLGSLDLPRH.....P.D.GRPAACLH
  41 lqaA...LH....LIAAAWNGRM.L.T.PE..RLVVHRHLGSLDLPRD.....P.Q.GRADALIH
  42 tkhI...LD....FVHLNNTNEV.PeL.PA..SYDAYCYEETLKLPVD.....E.Q.GERIGMVH
  43 vesL...LD....YLDKKNQDQI.P.EkSH..KLGFYEVFERLDYPR-.....I.N.EEIAAMIH
  44 vqaC...LE....ALSSVASGSP.T.Y.PD..EFVVHSHLGSLDLPRD.....A.L.GQPAACVH
  45 ldsC...LK....EISNVINSKT.V.Y.PE..QLIVHRHLKNIDFPRD.....S.S.GVPSSLVH
  46 vmhA...LD....YLELKNTGQT.PdL.PM..QMGGYRFTKKIRLPEN.....E.E.GDITAMIH
  47 ...LqtfID....EIALAKSGKA.K.F.PK..NILVHRHLKSIDFPRD.....E.S.GNQCGFIH
  48 letL...ME....QIHEVKNLNL.F.F.PN..KLIIHRHIKSIDFPRD.....E.E.GNIDGYVH
  49 ieaC...FE....ALASVRSGVV.R.L.PR..QVVVHRHLGSCDVPRG.....E.S.DQPQALVH
  50 trhI...LD....YVDLHNTNAL.PeL.PS..SYEAFEYKETLKLPEN.....E.N.GERIGMVH
  51 letC...CQ....ELAAARAGTG.R.D.PH..NLVVHRHLGSVDLPRD.....Q.R.DCAAAMVH
  52 issL...RD....EIDKLKKNLI.E.L.PK..DLVVHVHQGSVDYPRD.....E.K.GDIDGLIH
  53 trhI...LD....YVDLHNTNAL.PeL.SS..SYEAFEYTETLKLPEN.....E.N.GERIGMVH
  54 ...-...LDltfeFVQEFNAGHT.F.E.GG..QVEAYMMEDPVDYPRD.....P.TtGEITASVH
  55 vqhC...LD....FLELWNQKAV.PeL.PS..EREGYRFLEKVQLPEN.....E.A.GELTAMLH
  56 ltmV...LD....YLEQHNLGQV.G.E.LN..DYDAYFYTEEVMIPVD.....H.D.GMRVATVH
  57 lesC...LR....ALYQVRQELA.R.L.PD..ALVVHRHLGSRDLPKA.....E.N.GEPQALVH
  58 aevI...LD....FCMAYNNGSI.S.T.DNlpQCEAFRLGENVGFPLD.....E.N.GQRTAMIH
  59 ltaV...LD....YVEKHNLNQI.G.L.LS..DYEAFFYTEEIRVPLD.....Q.E.GMRQALVH
  60 larI...LA....YLQASTSGNV.P.A.AD..NCTVYQQIDTIDYPRD.....E.Q.GQIVAEIA
  61 ...-...--....--------MD.L.P.AF..EMDIYRNLGSVDFPRT.....A.D.GDLAGTVH
  62 ...-...--....----------.-.-.--..-----------QAVRA.....E.V.GPSNPGLR


             50        60            70               80        90     
             |         |             |                |         |     
   1 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   2 PNLQ..DQDWKPLHPGDPMFLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   3 PNLQ..DQDWKPLHPGDPMFLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   4 PNLQ..DQDWKPLHPGDPMFLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   5 PNLQ..DQDWKPLHPGDPMFLTLDGK.T...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   6 PNLQ..DQDWKPLHPGDPMFLTLDGK.T...MPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   7 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   8 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
   9 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DYT...VYPVFVNEAAYYEKKEAFA
  10 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
  11 PNLQ..DQDWKPLHPGDPVFLTLEGK.S...IPLG..G..DST...VYPVFVNEAAYYEKKEAFA
  12 PNLQ..DQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
  13 PKLQ..DQDWKPLHPEDPVFLTLDGK.T...ISLG..G..DQT...VYPVFVNEAAYYEKKEAFA
  14 PKLQ..DQDWKPLHPEDPVFLTLDGK.T...IPLG..G..DQT...VYPVFVNEAAYYEKKEAFA
  15 PNLQlqDQDWKPLHPGDPVFVSLDGK.V...IPLG..G..DCT...VYPVFVNEAAYYEKKEAFA
  16 PNLQlsDQDWKPLHPGDPVFLTLEGK.S...IPLG..G..DST...VYPVFVNEAAYYEKKEAFA
  17 PHLQ..DCDWEPLNRGDPMFLTFDGR.T...ILYE..G..ANT...VYPTFINEAAYYEKQQAFV
  18 PNLQ..DCDWEPLTPGDPMFQTFDGK.T...IYYQ..G..PGT...VYPTFINEAAYYEKQQAFV
  19 NNLQ..DQDWNELKPGDPMFLTLDGR.M...IAYE..G..DCI...VYPTFINEAAYYEKNQAFT
  20 PQLQ..DRDFQPLQPGAPIFQMFSGE.D...LLYE..G..EST...VYPVFINEAAYYEKGVAFV
  21 PQLQ..DHDFEPLRPGEPIFKLFSGE.D...VLYE..G..DSI...VYPVFINEAAYYEKHVAFL
  22 PQLQ..DHDFEPLRPGEPIFKLFSGE.D...VLYE..G..DSI...VYPVFINEAAYYEKHVAFL
  23 PQLQ..DRDFQPLQPGAPIFQMFSGE.D...LLYE..G..EST...VYPVFINEAAYYEKGVAFV
  24 PNLQ..DQDWQPLNNGDPLFLTLDGE.V...IAYK..G..DCT...AYPTFINEAAYYEKKQAFV
  25 PDIQ..FRDYEPLNPGDPLFLTLDGK.A...IAYE..G..TST...VYPIFINEAAYYEKGIAML
  26 SRLQ..DHDFEPLRPGEPIFKLFSGE.D...VLYE..G..DSV...VYPLFVNEAAYYEKRVAFL
  27 PDIQ..FRDYAPLNPGDPLFLTLDGK.A...IAYE..G..TSI...VYPIFINEAAYYEKGIAML
  28 PQLQ..GRDYQKLSPGEPMFLTFDNQ.T...IYYQ..E..ESP...VWPVFINEAAYYEKGIAMC
  29 PKLQ..DQDWKPLHPEDPVFLTLDGK.T...ISLG..G..DQT...VYPVFVNEAAYYEK-----
  30 PQLQ..DRDFCLLKRGDPLFLSFSGE.T...VTCE..E..EEP...LHPFFINEGAYYEKGIAFH
  31 PQLQ..DRDFCLLKRGDPLFLSFSGE.T...VKYE..E..EEP...LHPLFINECAYYEKGIAFH
  32 PELQ..DKDYQALNPGDPMFITFDNK.T...IVYE..G..AST...VWPIFINEAAYYEKGIAMC
  33 SELQ..DKDYLPLKPGDPIFQRLNGE.D...ILYN..G..EKQ...IYPVFINEAAYYEKKVAFI
  34 PQLQ..DRDFCLLHPEDPLFQTFSGE.T...LKYK..G..KEP...LYPFFINECAYYEKSIALS
  35 PERI..NQDWKPIKKDAPLFMDMEGK.T...KTYA..D..EDT...IWPVFIGEVAYKEKNIAMS
  36 PQLQ..FKDYEPLNPGDPMFLTFAGK.D...IFYE..G..EST...VYPIFINEAAYYEKGIAMY
  37 KDIQ..GRDWYPIKNGHPLFESLSGDlT...LLLE..GglEEE...FVPVFINEAAYAEKNIAMS
  38 PNLQ..GRDWQPLKAGDPLFIDAESN.T...VVFD..G..EDG...LVPVFINEAAYAEKAIALS
  39 QSVQ..DNDFEPLRSGDPIFTLFDGT.E...IFWE..G..DYE...AYPHFINEAAYYDNNLAMS
  40 PLRQ..HRDWQVIRPGDPLFVTAGGE.T...LRYEptD..PEP...LWPVFINEAAYGEKGIALS
  41 PELQ..GRDWSPIRRGDPLFLTAAGD.T...ISYS..G..PDG...VVPVFINEAAYAEKAIALS
  42 QSVQ..DNDFEPLRSGDPIFTLFDGT.E...IFWE..G..DYE...AYPHFINEAAYYDNNLAMS
  43 PNLQ..FKDYKPLNPGDDLFITFDGK.T...ITYQ..G..DST...VYPVFVNEAAYYEKGIAMC
  44 PSLQ..GRDWQPLQMGAPLFLWPDGE.V...FRFE..G..RDS...PIPVFINEAAYVEKHIAMS
  45 GDNP..GRDWYPIKNGHPLFESLSGDlT...LLLE..GglEEE...FVPVFINEAAYAEKNIAMS
  46 PNLQ..NKDYEEIRPGDPLFITLGGE.T...IPYQ..G..DKA...VYGAFINEAAYYDQHIGLS
  47 SQIQ..GKDWIPINRETPLFEDTEGN.T...VKLS..A..ENFqedLIPVFINEAAYLEKGIAMS
  48 SLRQ..SKDWQELKKNDELFCKLNGE.I...IRFE..E..DEP...YIPVFINEAAYVEKNIAMS
  49 QRLQ..GRDWVPFKPLDAIFEAADGS.T...VETP..Qm.EHQ...SIPVFINEAAYAEKHIAFS
  50 KNVQ..DGDFKQLNSGDPIFTLFDGS.E...ISWE..G..DYE...AYPHFINEAAYYDNNLAMS
  51 PQLQ..GQDWRPLMDGAAMFELPRGG.T...VPLQa.D..EGE...TWPLFINEAAYAEKRIAFS
  52 PKRI..NRDWKMIKKGDPLFLNSQGI.I...YKYD..G..DQF...IWPVFIGEVAYKEKQIAMS
  53 KNVQ..DGDFKQLNSGDPIFTLFDGS.E...ICWE..G..DYE...AYPHFINEAAYYDNNLAMS
  54 SQLQ..DKDFKLLKPGDPIFKKFSGE.T...VTYE..G..EE-...LYSFFINECAYYEKKIAFL
  55 PDLQ..DQDYQEIAPGDPFFMTLSGE.T...IPYP..G..TTP...VYGAFINEAAYYDAHVGLS
  56 PMIC..GRDFGVVKPGEPLLATFFGY.D...IFWE..G..KQE...IYPHFINESAYSKANIAMA
  57 PELQ..GRDWQNIASTQAMFRAADGT.DrceAWVG..G..E--...-IPVFVNEAAYAEKSIAFS
  58 HALQ..DSDFKPLMPGMPVFRTFDGK.D...ITWN..S..DKE...TYPHFINEAAYFKLDVAFA
  59 PTIC..GRDFEAVKPGAPLLATFAGY.D...IHWN..G..KGE...IYPHFINESAYSTANIAMA
  60 PHI-..-RDYQAIKPGTPLFYHRRGN.V...TPYQ..G..AAT...VYPVFIGEAAYVEKGIAMA
  61 PQLQ..DHDFEPLRPGEPIFKLFSGE.D...VLYE..G..DSI...VYPVFINEASQ--------
  62 LSSQ..AQDSQPLLPGMPISQMFSDE.D...VLSE..G..EST...VYPVFINEAAYYENGMAVI


          100              110        
           |                |        
   1 KTTK..LT.LN....A.KS.IRST..LH....
   2 KTTK..LT.LN....A.KS.IRCS..LH....
   3 KTTK..LT.LN....A.KS.IRCS..LH....
   4 KTTK..LT.LN....A.KS.IRCC..LH....
   5 KTTK..LT.LN....A.KS.IRCC..LHd...
   6 KTTK..LM.LN....A.KS.IRCS..VH....
   7 KTTK..LT.LS....A.KS.IRST..LH....
   8 KTTK..LT.LS....A.KS.IRST..LH....
   9 KTTK..LT.LS....A.KS.IRST..LH....
  10 KTTK..LT.LS....A.KS.IRST..LP....
  11 KTTK..LI.LN....A.RS.IRSS..LH....
  12 KTTK..LT.LN....A.KS.IRST..LH....
  13 KTTK..LT.LN....A.NS.IRSS..LH....
  14 KTTK..LT.LN....A.NS.IRSS..LH....
  15 KTTK..LT.LN....A.KS.IRST..LH....
  16 KTTK..LI.LN....A.RS.IRSS..LH....
  17 TTCR..EI.LA....A.NA.IRKA..F-....
  18 TTRR..EA.LV....A.ST.IR--..--....
  19 TTQK..MT.LC....A.QS.IRCTe.PK....
  20 QTEK..FT.FT....V.PA.MP-A..LTpaps
  21 KSEK..IR.VT....V.PA.LLR-..LTprst
  22 KSEK..IR.VT....V.PA.LLR-..LTprst
  23 QTEK..FT.FT....V.PA.MP-A..LTpaps
  24 KTIK..ME.LT....A.GH.IRSS..AVgqn.
  25 FTEK..QL.IN....P.SS.----..--....
  26 KSEK..IR.IS....V.PA.LPG-..LTpsst
  27 FTEK..QL.IN....F.D-.----..--....
  28 LTKK..ES.IR....V.--.----..--....
  29 ----..--.--....-.--.----..--....
  30 LAKK..WI.LT....V.PS.VQVH..TKnsa.
  31 LAKR..MR.LT....I.PA.VQVQ..KD....
  32 LTQK..QQ.IN....I.--.----..--....
  33 ATEK..TH.CL....V.PA.LKVQ..--....
  34 LARK..RC.VV....V.PS.I---..--....
  35 FTKK..EV.VS....V.SD.QMYEefFS....
  36 LSQK..LQeI-....-.--.----..--....
  37 LTKK..EM.WD....VqKD.WIND..LSkll.
  38 LTKR..ET.WP....LpKD.WKEA..LAell.
  39 LGKK..IV.VS....T.N-.----..--....
  40 LTRR..ER.WP....C.EAaWAED..LQqla.
  41 VTSK..EE.WPlspeA.PG.ALQD..LL....
  42 LGKK..IV.VS....T.N-.----..--....
  43 LAKQreIV.VN....F.NN.----..--....
  44 LTCR..EV.CP....L.PEqWQGA..LQqlv.
  45 LTKK..EM.WD....VqKD.WIND..LSkll.
  46 FMEK..IN.IE....L.KQ.EG--..--....
  47 LTVR..ES.WR....FeRN.WYED..LKkiv.
  48 FTKR..EL.WN....FkKE.WKQA..LIdli.
  49 LTRR..EV.WT....MePQ.WLDH..LSell.
  50 LAKK..RI.VE....V.--.----..--....
  51 LTRR..EV.WP....IdPS.WGQA..LEqlm.
  52 YTNK..EV.IC....SkNE.WVQE..FHrl..
  53 LAKK..RI.VE....I.--.----..--....
  54 LGEK..VR.LD....-.--.----..--....
  55 LMEK..IT.IP....Y.RR.----..--....
  56 LAEK..KC.VR....A.SD.----..--....
  57 LTRR..EV.WP....VePN.WLLA..LKqll.
  58 TAQR..II.L-....-.--.----..--....
  59 LAKK..RR.VSs...V.--.----..--....
  60 LTQR..KT.IA....I.--.----..--....
  61 ----..--.--....-.--.----..--....
  62 QIEK..LP.LC....AcPA.ETRC..LApve.