CreatePredAlphaCost pred_alpha2k alpha11 T0287.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0287.t04.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 15 way_back 5 dry5 15 dry6.5 20 dry8 15 dry12 5 \ phobic_fit 2 \ sidechain 5 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 20 backbone_clashes 2 \ break 20 \ pred_alpha2k 3 \ pred_alpha04 3 \ constraints 10 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 include T0287.dssp-ehl2.constraints include T0287.t06.str2.constraints include T0287.t06.dssp-ebghstl.constraints include T0287.t06.stride-ebghtl.constraints include T0287.t06.bys.constraints include T0287.449a_45.rr.constraints