Best Alignments for T0287

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1b0b/T0287-1b0b-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b0b/T0287-1b0b-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3725e+005.56e-01 2fal a.1.1.2
1josA/T0287-1josA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1josA/T0287-1josA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0536e+003.92e-04 d.52.7.1
1e9gA/T0287-1e9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9gA/T0287-1e9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3747e+008.55e-01 1wgjA b.40.5.1
1tmxA/T0287-1tmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tmxA/T0287-1tmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6120e+001.77e-07
1a8y/T0287-1a8y-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a8y/T0287-1a8y-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0639e+001.14e-02 1a8y c.47.1.3
c.47.1.3
c.47.1.3
1hh8A/T0287-1hh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hh8A/T0287-1hh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6949e+002.23e+00 1e96B a.118.8.1
1alvA/T0287-1alvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1alvA/T0287-1alvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2029e+012.71e+00 1alvA a.39.1.8
1dk0A/T0287-1dk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dk0A/T0287-1dk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2169e+016.06e+02 1b2vA d.35.1.1
1dc1A/T0287-1dc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dc1A/T0287-1dc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3864e+011.70e-09 1dc1A c.52.1.11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001