Best Alignments for T0287

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hzgA/T0287-1hzgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hzgA/T0287-1hzgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1500e-011.03e+04 1hzgA d.194.1.1
1e96B/T0287-1e96B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e96B/T0287-1e96B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5000e+001.55e+00 1e96B a.118.8.1
1g24A/T0287-1g24A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g24A/T0287-1g24A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7356e+013.12e-04 1g24A d.166.1.1
1knqA/T0287-1knqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1knqA/T0287-1knqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7516e+011.99e-04 c.37.1.17
2a9kB/T0287-2a9kB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9kB/T0287-2a9kB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0314e+011.64e-04
1b0b/T0287-1b0b-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b0b/T0287-1b0b-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1546e+013.98e+00 2fal a.1.1.2
2trcP/T0287-2trcP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2trcP/T0287-2trcP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3117e+019.84e-04 1b9yC c.47.1.6
1dh3A/T0287-1dh3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dh3A/T0287-1dh3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4500e+012.13e+03 1a02J h.1.3.1
2sas/T0287-2sas-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2sas/T0287-2sas-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4575e+011.67e+01 2sas a.39.1.5
1sz9A/T0287-1sz9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sz9A/T0287-1sz9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6176e+014.15e-07 a.118.9.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001