Best Alignments for T0285

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2lao/1lst-T0285-fssp-local-adpstyle5.a2m 2lao/ 5.0950e+003.40e+03 1lst c.94.1.1
1gawA/1fnc-T0285-fssp-local-adpstyle5.a2m 1gawA/ 7.0742e+001.37e+02 1fnc b.43.4.2
1t8cA/T0285-1t8cA-t06-global-adpstyle1.a2m 1t8cA/ 8.5478e+002.05e-02
2a59A/T0285-2a59A-t06-global-adpstyle1.a2m 2a59A/ 1.3717e+015.01e-01
1fjrA/T0285-1fjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fjrA/ 1.6911e+017.21e-03 1fjrA b.102.1.1
1ifrA/T0285-1ifrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ifrA/ 1.9337e+011.06e-01 b.1.16.1
1wuzA/T0285-1wuzA-t06-global-adpstyle1.a2m 1wuzA/ 2.3000e+016.76e+00
1c41A/1di0A-T0285-fssp-local-adpstyle5.a2m 1c41A/ 2.3412e+012.44e+03 1di0A c.16.1.1
2etlA/T0285-2etlA-t06-global-adpstyle1.a2m 2etlA/ 2.7361e+013.15e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001