Best Alignments for T0285

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qg0A/T0285-1qg0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qg0A/ 1.2300e+016.40e+03 1fnc b.43.4.2
2lao/T0285-2lao-t06-local-adpstyle1.a2m 2lao/ 1.4650e+011.61e+00 1lst c.94.1.1
1ifrA/T0285-1ifrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ifrA/ 1.5404e+012.09e-01 b.1.16.1
1fjrA/T0285-1fjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fjrA/ 1.7731e+017.21e-03 1fjrA b.102.1.1
1tu1A/T0285-1tu1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tu1A/ 1.8791e+017.05e-04 d.107.1.3
1t8cA/T0285-1t8cA-t06-global-adpstyle1.a2m 1t8cA/ 2.1345e+012.05e-02
1v8fA/T0285-1v8fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8fA/ 2.4677e+016.39e-07 c.26.1.4
2a59A/T0285-2a59A-t06-global-adpstyle1.a2m 2a59A/ 3.0161e+015.01e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001