Best Alignments for T0283

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1sheA/T0283-1sheA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sheA/T0283-1sheA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1750e+003.10e-05 d.274.1.1
1tffA/T0283-1tffA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tffA/T0283-1tffA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8804e+001.63e-04 d.3.1.11
1am4A/T0283-1am4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1am4A/T0283-1am4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2808e+006.71e-06 1tx4A a.116.1.1
1qs2A/T0283-1qs2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qs2A/T0283-1qs2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2665e+002.24e-08 1qs1A d.166.1.1
d.166.1.1
1csn/T0283-1csn-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1csn/T0283-1csn-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1040e+001.02e-05 1csn d.144.1.7
1ab7/T0283-1ab7-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ab7/T0283-1ab7-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1223e+003.00e-05 1ay7B c.9.1.1
2fvhA/T0283-2fvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fvhA/T0283-2fvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8410e+002.02e-04
1b8zA/T0283-1b8zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b8zA/T0283-1b8zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3236e+014.55e-01 1huuA a.55.1.1
2bh9A/T0283-2bh9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bh9A/T0283-2bh9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4514e+014.43e+01
1qc7A/T0283-1qc7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qc7A/T0283-1qc7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7070e+016.34e-05 1qc7A a.118.14.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001