# TARGET T0281 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0281.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 53 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.021 0.005 0.003 0.007 0.137 0.827 2 W 0.043 0.032 0.011 0.015 0.181 0.719 3 M 0.048 0.019 0.021 0.023 0.239 0.650 4 P 0.039 0.018 0.034 0.047 0.242 0.621 5 P 0.055 0.043 0.017 0.050 0.205 0.629 6 R 0.035 0.022 0.005 0.037 0.088 0.814 7 P 0.002 0.001 0.007 0.939 0.016 0.035 8 E 0.001 0.001 0.002 0.984 0.008 0.006 9 E 0.001 0.001 0.001 0.993 0.003 0.003 10 V 0.001 0.001 0.001 0.998 0.001 0.001 11 A 0.001 0.001 0.001 0.999 0.001 0.001 12 R 0.001 0.001 0.001 0.999 0.001 0.001 13 K 0.001 0.001 0.001 0.999 0.001 0.001 14 L 0.001 0.001 0.001 0.998 0.001 0.001 15 R 0.001 0.001 0.001 0.995 0.003 0.001 16 R 0.001 0.001 0.002 0.966 0.018 0.014 17 L 0.001 0.001 0.004 0.789 0.058 0.147 18 G 0.005 0.001 0.001 0.013 0.081 0.900 19 F 0.093 0.005 0.001 0.006 0.090 0.804 20 V 0.610 0.019 0.004 0.010 0.090 0.266 21 E 0.763 0.012 0.011 0.011 0.079 0.124 22 R 0.804 0.005 0.016 0.007 0.061 0.107 23 M 0.713 0.010 0.012 0.005 0.107 0.152 24 A 0.537 0.021 0.012 0.010 0.246 0.173 25 K 0.270 0.015 0.007 0.006 0.340 0.363 26 G 0.182 0.013 0.010 0.005 0.502 0.288 27 G 0.258 0.009 0.023 0.006 0.420 0.284 28 H 0.758 0.005 0.019 0.007 0.116 0.095 29 R 0.918 0.005 0.009 0.004 0.033 0.031 30 L 0.966 0.002 0.002 0.001 0.010 0.019 31 Y 0.973 0.001 0.002 0.001 0.011 0.012 32 T 0.955 0.010 0.001 0.001 0.012 0.022 33 H 0.646 0.011 0.004 0.001 0.300 0.038 34 P 0.046 0.002 0.017 0.004 0.901 0.030 35 D 0.021 0.002 0.017 0.002 0.931 0.026 36 G 0.060 0.008 0.024 0.005 0.862 0.041 37 R 0.421 0.013 0.005 0.005 0.156 0.400 38 I 0.859 0.024 0.002 0.002 0.023 0.090 39 V 0.892 0.007 0.001 0.002 0.017 0.081 40 V 0.801 0.023 0.002 0.002 0.031 0.140 41 V 0.394 0.020 0.004 0.005 0.088 0.489 42 P 0.163 0.015 0.009 0.006 0.171 0.635 43 F 0.062 0.018 0.012 0.009 0.330 0.568 44 H 0.025 0.012 0.022 0.017 0.456 0.469 45 S 0.008 0.011 0.088 0.026 0.640 0.227 46 G 0.012 0.010 0.136 0.054 0.610 0.179 47 E 0.012 0.020 0.106 0.045 0.487 0.329 48 L 0.008 0.024 0.021 0.040 0.376 0.532 49 P 0.003 0.004 0.008 0.036 0.181 0.766 50 K 0.004 0.005 0.058 0.572 0.142 0.219 51 G 0.004 0.002 0.042 0.729 0.120 0.103 52 T 0.002 0.002 0.030 0.888 0.033 0.046 53 F 0.001 0.001 0.004 0.985 0.005 0.006 54 K 0.001 0.001 0.002 0.991 0.005 0.002 55 R 0.001 0.001 0.001 0.994 0.004 0.002 56 I 0.001 0.001 0.001 0.995 0.003 0.001 57 L 0.001 0.001 0.003 0.990 0.006 0.001 58 R 0.001 0.001 0.008 0.981 0.009 0.002 59 D 0.001 0.001 0.012 0.965 0.016 0.007 60 A 0.001 0.001 0.008 0.921 0.023 0.048 61 G 0.001 0.001 0.002 0.019 0.058 0.920 62 L 0.004 0.005 0.001 0.003 0.066 0.922 63 T 0.012 0.003 0.001 0.008 0.108 0.867 64 E 0.014 0.003 0.280 0.486 0.168 0.049 65 E 0.017 0.001 0.294 0.544 0.118 0.026 66 E 0.021 0.001 0.287 0.575 0.093 0.022 67 F 0.055 0.007 0.065 0.591 0.088 0.194 68 H 0.048 0.024 0.046 0.521 0.102 0.259 69 N 0.012 0.004 0.022 0.439 0.083 0.440 70 L 0.001 0.001 0.002 0.030 0.026 0.941