Best Alignments for T0280

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ecfA/T0280-1ecfA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ecfA/T0280-1ecfA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1058e-199.8784e-28 1ecfB d.153.1.1
c.61.1.1
1gph1/T0280-1gph1-t2k-local-adpstyle5.a2m 1gph1/T0280-1gph1-t2k-local-adpstyle5.al 8.4257e-181.0642e-21 1ecfB
1bzyA/T0280-1bzyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bzyA/T0280-1bzyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3475e-173.0466e-25 1qk3A c.61.1.1
1a3c/T0280-1a3c-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1a3c/T0280-1a3c-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3962e-166.7292e-24 1a3c c.61.1.1
1i5eA/T0280-1i5eA-t04-global-adpstyle5.a2m 1i5eA/T0280-1i5eA-t04-global-adpstyle5.al 2.1310e-161.8684e-22 c.61.1.1
1hgxA/T0280-1hgxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hgxA/T0280-1hgxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8546e-162.9900e-23 1tc1A c.61.1.1
1grvB/T0280-1grvB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1grvB/T0280-1grvB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3611e-169.8274e-25 c.61.1.1
1j7jA/T0280-1j7jA-t2k-global-adpstyle1.a2m 1j7jA/T0280-1j7jA-t2k-global-adpstyle1.al 5.4496e-162.0378e-20 c.61.1.1
1g9tA/T0280-1g9tA-t2k-global-adpstyle5.a2m 1g9tA/T0280-1g9tA-t2k-global-adpstyle5.al 9.1259e-165.0402e-20 c.61.1.1
1o5oA/T0280-1o5oA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o5oA/T0280-1o5oA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2656e-154.6315e-24 c.61.1.1
1i0lA/T0280-1i0lA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1i0lA/T0280-1i0lA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5883e-153.0517e-23 c.61.1.1
1nonA/T0280-1nonA-t04-global-adpstyle1.a2m 1nonA/T0280-1nonA-t04-global-adpstyle1.al 3.4637e-153.4697e-21
1ufrA/T0280-1ufrA-t04-global-adpstyle1.a2m 1ufrA/T0280-1ufrA-t04-global-adpstyle1.al 3.6027e-152.1636e-21 c.61.1.1
1dkuA/T0280-1dkuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dkuA/T0280-1dkuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6546e-148.6467e-21 1dkuA c.61.1.2
1g2qA/T0280-1g2qA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g2qA/T0280-1g2qA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.1618e-147.0931e-21 c.61.1.1
1ibsA/T0280-1ibsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ibsA/T0280-1ibsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0766e-136.8857e-20 c.61.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001