Best Alignments for T0277

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jogA/T0277-1jogA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jogA/T0277-1jogA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6853e-192.0612e-25 a.24.16.2
1s7zA/T0277-1s7zA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s7zA/T0277-1s7zA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.2803e+005.2805e-01 unknown_sccs
1o3uA/T0277-1o3uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o3uA/T0277-1o3uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0706e+015.4485e-01 a.24.16.3
1cxc/T0277-1cxc-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1cxc/T0277-1cxc-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1427e+011.8722e+00 1ycc a.3.1.1
1s07A/T0277-1s07A-t04-local-adpstyle1.a2m 1s07A/T0277-1s07A-t04-local-adpstyle1.al 2.0892e+011.8422e+01 c.67.1.4
1s09A/T0277-1s09A-t04-local-adpstyle5.a2m 1s09A/T0277-1s09A-t04-local-adpstyle5.al 2.4499e+012.2127e+01 c.67.1.4
1s08A/T0277-1s08A-t04-local-adpstyle5.a2m 1s08A/T0277-1s08A-t04-local-adpstyle5.al 2.4533e+012.2153e+01 c.67.1.4
1qi2A/7a3hA-T0277-fssp-local-adpstyle5.a2m 1qi2A/7a3hA-T0277-fssp-local-adpstyle5.al 2.6859e+019.3198e+00 7a3hA c.1.8.3
1lf1A/T0277-1lf1A-t2k-global-adpstyle1.a2m 1lf1A/T0277-1lf1A-t2k-global-adpstyle1.al 2.7054e+012.0948e+01 c.1.8.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001