Best Alignments for T0275

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tq8A/T0275-1tq8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1tq8A/T0275-1tq8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3493e-181.1376e-21
1mjhA/T0275-1mjhA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mjhA/T0275-1mjhA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.8584e-186.1014e-24 1mjhA c.26.2.4
1jmvA/T0275-1jmvA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jmvA/T0275-1jmvA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8945e-153.9682e-20 c.26.2.4
1q77A/T0275-1q77A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q77A/T0275-1q77A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3408e-053.1177e-08 c.26.2.4
1np7A/T0275-1np7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1np7A/T0275-1np7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.2659e-022.5251e-05 a.99.1.1
c.28.1.1
2ng1/T0275-2ng1-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2ng1/T0275-2ng1-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.0019e-023.9517e-04 1ng1 c.37.1.10
a.24.13.1
1ng1/T0275-1ng1-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ng1/T0275-1ng1-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6134e-023.9058e-04 1ng1 a.24.13.1
c.37.1.10
1jpnA/T0275-1jpnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jpnA/T0275-1jpnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.1058e-029.7623e-04 a.24.13.1
c.37.1.10
1ls1A/T0275-1ls1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ls1A/T0275-1ls1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3240e-021.0069e-03 c.37.1.10
a.24.13.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001