Best Alignments for T0273

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ho1A/T0273-1ho1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ho1A/T0273-1ho1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.4886e+007.9825e-01 1ho1A c.1.24.1
1f3vB/1d0aB-T0273-fssp-local-adpstyle5.a2m 1f3vB/1d0aB-T0273-fssp-local-adpstyle5.al 4.9050e+002.1429e+00 1d0aB b.8.1.1
h.1.2.1
1czzA/1d0aB-T0273-fssp-local-adpstyle5.a2m 1czzA/1d0aB-T0273-fssp-local-adpstyle5.al 4.9883e+002.1731e+00 1d0aB b.8.1.1
h.1.2.1
1p32A/T0273-1p32A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1p32A/T0273-1p32A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3175e+001.6052e+00 1p32A d.25.1.1
1m5wA/T0273-1m5wA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1m5wA/T0273-1m5wA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.6653e+001.3066e+00 c.1.24.1
1ezwA/T0273-1ezwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ezwA/T0273-1ezwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.6881e+001.2697e+00 1ezwA c.1.16.3
1qwgA/T0273-1qwgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qwgA/T0273-1qwgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3077e+012.4589e+00 unknown_sccs

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001