Best Alignments for T0272

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mnp/1arv-T0272-fssp-local-adpstyle5.a2m 1mnp/1arv-T0272-fssp-local-adpstyle5.al 2.5276e+018.2153e+00 1arv a.93.1.1
1llc/1hyhA-T0272-fssp-local-adpstyle5.a2m 1llc/1hyhA-T0272-fssp-local-adpstyle5.al 3.4611e+011.1790e+01 1hyhA d.162.1.1
c.2.1.5
1md8A/T0272-1md8A-t04-global-adpstyle1.a2m 1md8A/T0272-1md8A-t04-global-adpstyle1.al 4.0229e+011.6360e+01 b.47.1.2
g.18.1.1
1md7A/T0272-1md7A-t2k-global-adpstyle1.a2m 1md7A/T0272-1md7A-t2k-global-adpstyle1.al 4.1546e+011.5166e+01 b.47.1.2
g.18.1.1
1gpzA/T0272-1gpzA-t2k-global-adpstyle5.a2m 1gpzA/T0272-1gpzA-t2k-global-adpstyle5.al 4.4877e+019.8606e+00 b.47.1.2
g.18.1.1
1ey1A/1eyvA-T0272-fssp-local-adpstyle5.a2m 1ey1A/1eyvA-T0272-fssp-local-adpstyle5.al 4.6620e+011.1765e+01 1eyvA a.79.1.1
1sstA/T0272-1sstA-t2k-global-adpstyle5.a2m 1sstA/T0272-1sstA-t2k-global-adpstyle5.al 4.7845e+013.0762e+01
1svy/T0272-1svy-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1svy/T0272-1svy-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.0346e+011.5296e+01 1svy d.109.1.1
1ssmA/T0272-1ssmA-t2k-global-adpstyle1.a2m 1ssmA/T0272-1ssmA-t2k-global-adpstyle1.al 5.0724e+012.9834e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001