Citations (SAM, SAM-T99, HMMs)
10 20 30 40 50
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1 MWLTKLVLNPASRAARRDL....ANPYEMHRTLSKAVSR...ALEEGR.....ERLLWRLEP.AR
2 MYLSRITLHTGQLSPAQLLhlvdRGEYVMHQWLWDLFPG...GKER--.....-QFLYRREE.LQ
3 MYLSRITLHTSELSPAQLLhlveRGEYVMHQWLWDLFPG...SKER--.....-QFLYRREE.LQ
4 MYLSKVII------ARAWS....RDLYQLHQGLWHLFPN...RPDAAR.....-DFLFHVEK.RN
5 MYLSKIVLRQSSQTANILAklsaNGVYTSHQLLWKLFST...DEKR--.....-QFLFR-EE.IG
6 VWLTRIVPDPRSRDARRDLggn.DSAMGLHRRLMSLYPCdagPDPRAR.....FGVLFRIED.TP
7 MYLSKVLIN------GTAC....RNPYEIHRVLWKLFPE...DADAER.....-DFLFRVER.SG
8 MYLSRIQLRFNNLRPEMLAkwnsARPYASHQWLWQLFPE...QELR--.....-QFLFREEA.HG
9 MYISMVALS---------V....IDTYEQHQAIWELFPN...SSERKR.....-DHLFRVEN.IN
10 MWMSKLVLDPR----RAVG....KNLYDTHRLLWNLFAD...APDRTR.....-DFLFREQD.--
11 MYLTRLTLDPRSAQARRDL....ADAYDMHRTLVRAFVR...DERDAP.....GRFLWRLEPgAD
12 -------------------....------HAAVMSSFPTll.PSDTDG.....PRVLWRIDR.TS
13 MIATMLTLSRKDVKALR-I....TDSYSLHRVIYSLFED...VRSEAEkr6vpSGFLFA-DK.GG
14 -----------------EL....TDPSFRHRAVMALFPDtdsPLPRKS.....VDILFRFEQ.LA
15 ------------------Q....GGTDGGHRLVWTLFAD...DPKASR.....-DFVFR---.--
16 -------------------....----------------...------.....---------.--
17 -------------------....----------------...------.....---------.--
18 -------------------....----------------...------.....---------.--
60 70 80 90 100 110
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1 GLEPPVVLVQTLTEPDWSVLDEGYAQVF.....PPKPFHPA..LKPGQRLRFRLRANPAKRLAAT
2 G--AFRFFVLSQERPA-----ESETFTI.....ECRSFVPE..LRTGQQLCFNLRANPTICKAGK
3 G--AFRFFVLSQEQPA-----ASAIFDV.....QTRPFAPT..LSAGQTLRFNLRANPTVCKNGK
4 TPEGCHVLLQSAQMPV----STAVATVI.....KTKQVEFQ..LQVGVPLYFRLRANPIKTILDN
5 IMGLPVFYVLSKTSPQ----TESPLFEV.....ETKAFYPQ..LKEGQRLAFKLRVNPTICITDP
6 A--GAHILLQSAHEPDLTRLPDGYGQAItr...PLDPLLDA..LKPGLTIRYRCTASPVRKPGAN
7 Q-QSVEVLLQSRREPT--MAASREVLLM.....GSKPYLLS..LQQDQQLRFMLVANPIKTINDE
8 G-----FFMLSAIPPL----LQHSLFLI.....ETKLFNPQ..LTNGLELDFQLRANPVITRNGK
9 TSGQVMVLLQSASEPQ----SNVKATVL.....QSKLFDPQ..ISQGEYYKFKLLANPTKCLSQG
10 --EPYTFLTVSRRQPE----DTTGWWSI.....QIKPYAPK..LQAGDAVAFSLRVNAVVKRNEN
11 AWASPTLLVQSCESGDWDVLQGLPGYLQrpa..ECKALDLEalIRPQWRYRFRLLANPTVTRA--
12 R-AEVFLYIVSPPKPDLTHLVEQAGWPTqp7syDYTPFLSR..LAKGDVWAFRLTANPVHSIRRK
13 DAKGRKILILSDRPPLQPAHGELV----.....-SRPVPEE..FLQHRFYKFEVTLNPTRKENKS
14 G-QPPFFLIQSTVAPKQVDNLDSEVQHR.....TVS--LRR..FSPKSAVRFRISINGIRRQTTE
15 EAEPGRYLIVSARPPG----DGQGLWRL.....ETKPYAPA..FREGQRFGFTLRANPATAVKQA
16 ----------SENEPI----DELNVWDI.....DVKQYDPI..LKSGQKLAFSLRANPIVSKRDE
17 ---------------------------L.....AAKAMPED..WREGRRLAFDLRARPVRRLLKP
18 ----------------------------.....-LDPFLAR..LDKGSRVRYRIVASPTKRLGRS
120 130 140 150 160
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1 GK.....RVALKTPAEKVAWLERRLEEGGFRLL.....EGERGPWVQILQDTFLEVRR.....KK
2 RHd17gsDVWLHQQQAALDWLAAQGERSGFTLL.....DTSVDAYRQQQ---------.....-L
3 RHd17sqDIWSYQQQAALTWLARQGEQNGFTLR.....EASVDAYRQQQ---------.....-I
4 QK.....RLDSKGNIKRCRVPLIK-EAEQIAWL.....QRKLGNAARVED-VHPISER.....PQ
5 SGk13kfQAKQQGETEQGKIKAMMENAARNWLL.....NHRRMQQWGIQFDNLLDIEGytq..HR
6 TRal6lpAVVPLNGAAADEWWTRQADAAGLKPL.....ALHPHPLDAAQG--------.....VR
7 SA.....RLNSANEIKKCRVPLIR-EEDLRAWL.....KRKLEGVAVIEAVEVEKRPAm....NF
8 RSd18keRWWELQQQAAQAWLEQQGQQHGFRLI.....APEPDDFAMWAGDEYSELQAh11qhRF
9 KK.....VIEIKDENEQIQWLQRKLRGANVTVT.....ALE-----------------.....-S
10 GKq12clRMKELNQNAQMPTRAEIAQEAGTRWLla7alGLSIESAAILVEGCKVERFV.....KR
11 GK.....RRGLLGEAEQLAWLQRQGERHGFAV-.....-----KAVLVSASDLLDS--.....--
12 AGeptk.LTAHLTQRYQKKWLLQRQDAAGFRVV.....EKPAEKRRLPEGDEHELIVHnr6wnFS
13 GK.....RVPIKTREEVAAWFGGK---------.....--SQTSWGFSVDPARLDVRMlpv..MQ
14 HNgr8tsPVPFDSDEKAPSHITRM-----TPWV.....QKKLNGALRNVEILNHQREVigtk.HR
15 GEt19tpLTVEDRERVALDWLLDR-QQGFGVLF.....ERALCSAGGYRQ--------.....-V
16 NDk25epNMPDIVQRKGSEWLLRKGDMNGFSI-.....-----NAEQIRVDAYQNH--.....KL
17 AGv17lrRFPEGRPAEGVAGAPITREGVYFQWL.....AERLSGAARVEE-VRLARFE.....RR
18 ENn16reYTWALRGAAAEEWWHSRAAANGLELL.....STYAQTLDDVRD--------.....-P
170 180 190 200 210
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1 DGEEA.GKLLQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP
2 RRENS.RQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKP
3 RRGKD.RQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKP
4 YFSGD.GKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAP
5 SVKKQ.GQKIQFSSVDFQGLLTITNGELYLEQYAKGFGRAKAMGCGLMLIR-
6 AGNGD.KQRIRHNRIRFDGSATITDPDLLRQKITEGIGRGKAYGCGLLSIAP
7 RKARE.KRVGKVQAVSFHGVLSVTDPVGLISLINTGIGPAKAFGCGLLSL--
8 VRKDQ.ETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMV--
9 VLVKS.RKSFTSRFVCFEGILQVDKPDQIYSVLVMGIGRKKHAGAGLLSLA-
10 ATRDTrSGVVSLGIMDLQGTAEVKDPQLLLQALFQGVGPAKGFGCGLLLI--
11 -RRKG.GAPIVLQRVCFEGLLQVVEADALRRALASGIGPAKAFGCGLLSV--
12 KGARK.GRPVSLVTVTFDGRLEVTDPDALRRALISGIGRAKAYGCGLMTLAP
13 FSKQG.DRTVTHGAARVSGMLRVENRDLFIESFNKGIGRGRAFGFGLLQIEP
14 GGKAA.SMTIQIDTVD--GFGIVEDPELLNELILHGVGRAKAYGCGLLSV--
15 RVPRG.GKAITFSVIDYEGVFTVRDPGLLGQALVRGIGKAKAYGCGLMLL--
16 FKPKG.KHHVSFSTVDIVGTLTVTDPDIFRDALFKGIGPAKGFGCGMLLVRP
17 AVLRG.SKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLRP
18 GTADR.SRKIRHPAVRFDGEAVISDVDAVRHAVLNGIGRGKSYGCGLLSLA-