Best Alignments for T0272

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1q9uA/T0272-1q9uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q9uA/T0272-1q9uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.8997e+001.7559e-01 unknown_sccs
1oxkA/T0272-1oxkA-t2k-local-adpstyle5.a2m 1oxkA/T0272-1oxkA-t2k-local-adpstyle5.al 1.5574e+011.5170e+01 a.24.10.2
1c03A/1qspA-T0272-fssp-local-adpstyle5.a2m 1c03A/1qspA-T0272-fssp-local-adpstyle5.al 1.5616e+015.9918e+00 1qspA a.24.10.2
1mo9A/T0272-1mo9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mo9A/T0272-1mo9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5779e+017.7873e+00 c.3.1.5
d.87.1.1
1mnp/1arv-T0272-fssp-local-adpstyle5.a2m 1mnp/1arv-T0272-fssp-local-adpstyle5.al 1.7320e+015.9726e+00 1arv a.93.1.1
1cqjA/2scuA-T0272-fssp-local-adpstyle5.a2m 1cqjA/2scuA-T0272-fssp-local-adpstyle5.al 1.8944e+015.6369e+00 2scuA c.2.1.8
c.23.4.1
1m6iA/T0272-1m6iA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1m6iA/T0272-1m6iA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9472e+016.5765e+00 c.3.1.5
d.87.1.1
1gv4A/T0272-1gv4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gv4A/T0272-1gv4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9666e+017.6342e+00 c.3.1.5
d.87.1.1
1an9A/T0272-1an9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1an9A/T0272-1an9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3806e+017.9810e+00 1an9A c.4.1.2
d.16.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001